Factsheet for Bra012478.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY58595	Canola	mitochondrion	100.0	100.0
CDY53122	Canola	mitochondrion	96.59	96.59
AT1G25420.1	Thale cress	mitochondrion	87.93	87.93
Zm00001d052541_P001	Maize	extracellular	28.79	64.58
KRG90825	Soybean	mitochondrion	63.78	63.58
KRH35947	Soybean	mitochondrion	62.23	62.04
VIT_01s0011g03610.t01	Wine grape	mitochondrion	62.85	61.7
Solyc04g007230.2.1	Tomato	mitochondrion	58.51	58.51
TraesCS3D01G263400.1	Wheat	mitochondrion, plastid	52.32	52.98
TraesCS3A01G263500.1	Wheat	mitochondrion, plastid	52.32	52.98
TraesCS3B01G296700.1	Wheat	mitochondrion, plastid	52.01	52.66
KXG33152	Sorghum	mitochondrion	52.01	52.34
Os01t0687700-01	Rice	mitochondrion, plasma membrane	51.39	52.04
Zm00001d043813_P001	Maize	mitochondrion	51.39	51.71
KXG19452	Sorghum	mitochondrion	43.96	51.64
GSMUA_Achr3P29510_001	Banana	mitochondrion	51.39	50.92
GSMUA_Achr9P21370_001	Banana	mitochondrion	50.77	50.15
HORVU3Hr1G063860.1	Barley	plastid	51.7	46.01
Bra011633.1-P	Field mustard	mitochondrion, plastid	40.25	29.89
Bra035204.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	15.79	29.48
Bra010522.1-P	Field mustard	plastid	37.77	28.98
Bra036745.1-P	Field mustard	nucleus	43.96	25.09
Bra008502.1-P	Field mustard	nucleus	22.6	19.26
Bra021112.1-P	Field mustard	nucleus	14.24	19.25
Bra013184.1-P	Field mustard	mitochondrion	13.31	17.77
Bra018962.1-P	Field mustard	extracellular, vacuole	19.5	17.7
Bra006177.1-P	Field mustard	mitochondrion	19.2	17.61
Bra019826.1-P	Field mustard	mitochondrion	26.63	17.41
Bra027239.1-P	Field mustard	plastid	13.31	17.0
Bra030391.1-P	Field mustard	nucleus	18.58	12.0
Bra039012.1-P	Field mustard	mitochondrion	34.06	12.0
Bra011109.1-P	Field mustard	mitochondrion	31.89	11.2
Bra016733.1-P	Field mustard	mitochondrion	25.39	10.98
Bra011340.1-P	Field mustard	nucleus	0.31	1.06

Protein Annotations

EnsemblPlants:Bra012478.1	EnsemblPlants:Bra012478.1-P	EnsemblPlantsGene:Bra012478	Gene3D:1.20.1260.60	GO:GO:0006810	GO:GO:0008150
GO:GO:0015031	InterPro:Ist1	PANTHER:PTHR12161	PANTHER:PTHR12161:SF28	PFAM:PF03398	SEG:seg
UniParc:UPI000254124D	UniProt:M4D7L8	MapMan:35.2	:	:	:

Description

AT1G25420 (E=2e-143) | unknown protein

Coordinates

chrA07:+:7310789..7312725

Molecular Weight (calculated)

35764.1 Da

IEP (calculated)

9.425

GRAVY (calculated)

-0.325

Length

323 amino acids

Sequence
(BLAST)

001: MSLLNQLFNR GVFGAKCKTS LNFAIARMKL LQNKRDMHLK HMKKEIAQFL QAGQEPIARI RVEHVIREMN LWAAYEILEL FCEFVLARVP ILESQKECPR
101: ELREAIASII FAAPRCSEVP DLLQLKNLFG TKYGKEFIMV SSELRPDSGV NRTIIEKLSP ASPSGETRLK VLKEIAKEYS LNWDSSATEA EFMKSHEDLL
201: GGAKQIHRQD SVSESRPSQQ SHAQSLVSRE AEVLPAEATL RLQKLQAQNP VSKNMSSSPK LHVASQAPPD TRRDHSDVME RARAAIASAD HATAAARAAA
301: QLVNASYGAA PAVAAEGKPS NLM

Best Arabidopsis Sequence Match ( AT1G25420.1 )
(BLAST)

001: MSLLNQLFNR GIFGAKCKTS LNLAIARMKL LQNKRDMQLK HMKKEIAHFL QAGQEPIARI RVEHVIREMN LWAAYEILEL FCEFILARVP ILESEKECPR
101: ELREAIASII FAAPRCSEVP DLLQIKNLFG TKYGKEFIMV ASELRPDSGV NRTIIEKLSP TSPSGAARLK MLKEIAQEYS LNWDSSATEA EFMKSHEDLL
201: GGAKQIHRQD GISESRPSQQ GYGQSSVSRE VESLPAEATQ RFQKLQAQNP VSKSMPSSKL TSAFQAPPDT RRNQTDVMEI ARAALASADR ATAAARAAAQ
301: LVNVSYGATT PTVAAEGKPL NLM

Arabidopsis Description

At1g25420/F2J7_16 [Source:UniProtKB/TrEMBL;Acc:Q9C6L2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.