Factsheet for Bra011633.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 3
mitochondrion 4
cytosol 1
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX75521	Canola	plastid	99.54	100.0
CDX69159	Canola	plastid	97.47	96.36
Bra010522.1-P	Field mustard	plastid	82.3	85.04
AT4G35730.1	Thale cress	plastid	86.9	81.12
VIT_00s1235g00010.t01	Wine grape	mitochondrion	50.57	63.22
KRH07948	Soybean	mitochondrion	58.39	57.6
KRH69704	Soybean	mitochondrion	57.93	57.53
VIT_00s0302g00010.t01	Wine grape	endoplasmic reticulum	43.22	52.08
PGSC0003DMT400003908	Potato	plastid	54.94	48.88
Solyc02g083130.2.1	Tomato	plastid	54.71	43.83
Os09t0547200-01	Rice	mitochondrion	45.75	41.81
EER99304	Sorghum	plastid	45.29	41.04
GSMUA_Achr3P26880_001	Banana	mitochondrion	40.23	40.51
Bra012478.1-P	Field mustard	mitochondrion	29.89	40.25
TraesCS5D01G353300.1	Wheat	mitochondrion	43.68	39.42
TraesCS5B01G347800.1	Wheat	mitochondrion	43.68	39.26
TraesCS5A01G346800.1	Wheat	plastid	43.45	38.97
Zm00001d021453_P002	Maize	plastid	45.06	37.48
HORVU5Hr1G086370.1	Barley	nucleus, plastid	44.37	35.35
Bra036745.1-P	Field mustard	nucleus	35.4	27.21
Bra035204.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	9.66	24.28
Bra006177.1-P	Field mustard	mitochondrion	18.16	22.44
Bra021112.1-P	Field mustard	nucleus	11.95	21.76
Bra008502.1-P	Field mustard	nucleus	18.62	21.37
Bra027239.1-P	Field mustard	plastid	12.18	20.95
Bra018962.1-P	Field mustard	extracellular, vacuole	16.78	20.51
Bra019826.1-P	Field mustard	mitochondrion	22.99	20.24
Bra011340.1-P	Field mustard	nucleus	4.37	20.21
Bra013184.1-P	Field mustard	mitochondrion	10.34	18.59
Bra039012.1-P	Field mustard	mitochondrion	33.33	15.81
Bra011109.1-P	Field mustard	mitochondrion	32.64	15.43
Bra030391.1-P	Field mustard	nucleus	14.48	12.6
Bra016733.1-P	Field mustard	mitochondrion	21.61	12.58

Protein Annotations

EnsemblPlants:Bra011633.1	EnsemblPlants:Bra011633.1-P	EnsemblPlantsGene:Bra011633	Gene3D:1.20.1260.60	GO:GO:0006810	GO:GO:0008150
GO:GO:0015031	InterPro:Ist1	PANTHER:PTHR12161	PANTHER:PTHR12161:SF19	PFAM:PF03398	SEG:seg
UniParc:UPI0002546F61	UniProt:M4D576	MapMan:35.2	:	:	:

Description

AT4G35730 (E=8e-129) | unknown protein

Coordinates

chrA01:-:1336593..1338460

Molecular Weight (calculated)

48536.4 Da

IEP (calculated)

8.139

GRAVY (calculated)

-0.597

Length

435 amino acids

Sequence
(BLAST)

001: MTAAGVASVQ TKKLLKFSLS LFRRGFNSSK CKTAAKMAVA RIKLLRNKRQ VVVKQMRRDI ALLLQSGQDA TARIRVEHVI REQNILAANE IIELFCELIV
101: SRLTIITKQK ECPVDLKEGI ASLIFAAPRC SEIPELGDLK DIFEKKYGRD FVTAATELRP TCGVNRMLID KLSVRHPGGE FKLKIMKEIA KEFQVDWDTA
201: ETEQELLKPQ EETIVHDGPR AFVSASSLPV NRASDEPIDP TKAVPRSSSS MSSINTHYHD TESAAEAAAE LAKQAVAAAQ AAALLANRRD SSNSNKEFSV
301: SSSSSLDHSR RQSETSSYYY AKPSVANRRY SCNNEEDYAK TEAEAKETMR RRHTLPPPAT SEVKFDESDY YEEDTEPEEG PLQRRASSLP PDRAPPQAPE
401: SRRDSSGHHV HPKLPDYDEL AARFDAIRHS KGPLI

Best Arabidopsis Sequence Match ( AT4G35730.1 )
(BLAST)

001: MTAAEVASAQ TKKLMKFSLS LFRRGFNSSK CKTAAKMAVA RIKLIRNKRL VVVKQMRRDI AVLLQSGQDA TARIRVEHVI REQNIQAANE IIELFCELIV
101: SRLTIITKQK QCPVDLKEGI ASLIFAAPRC SEIPELGDLR DIFAKKYGKD FVSAATDLRP SCGVNRMLID KLSVRNPGGE YKLKIMKEIA KEFQVDWDTT
201: ETEQELLKPQ EESIDGPRKF VSASSLPVNR AAINEPIDPT KAVPRSTSSM SINTHYHDTE SAAEAATELA KQAVAAAQVA SLLATRRDSS NKEFSVSSDH
301: STHQKDSQYM DHHHHHPGSR RQSRDSETSS YYAKPGAENR GMGRRHSYNN PGINESDYEE EYTNTEAEAK ETMRRRHSYN PRSVPPPATS EIKFDESDYY
401: EEETEPDEPS QGRVSSLPPN RAPPQAPQSG ESRQDSSGHQ VHPKLPDYDI LAARFEAIRH SKGPLI

Arabidopsis Description

Regulator of Vps4 activity in the MVB pathway protein [Source:UniProtKB/TrEMBL;Acc:F4JNS8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.