Factsheet for Bra010522.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
plastid 3
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY69937	Canola	plastid	98.1	99.52
Bra011633.1-P	Field mustard	mitochondrion, plastid	85.04	82.3
AT4G35730.1	Thale cress	plastid	83.61	75.54
VIT_00s1235g00010.t01	Wine grape	mitochondrion	51.07	61.78
KRH07948	Soybean	mitochondrion	60.09	57.37
KRH69704	Soybean	mitochondrion	59.38	57.08
VIT_00s0302g00010.t01	Wine grape	endoplasmic reticulum	43.94	51.25
PGSC0003DMT400003908	Potato	plastid	56.29	48.47
Solyc02g083130.2.1	Tomato	plastid	56.06	43.46
Os09t0547200-01	Rice	mitochondrion	45.13	39.92
EER99304	Sorghum	plastid	45.37	39.79
TraesCS5D01G353300.1	Wheat	mitochondrion	44.66	39.0
GSMUA_Achr3P26880_001	Banana	mitochondrion	39.91	38.89
TraesCS5B01G347800.1	Wheat	mitochondrion	44.66	38.84
TraesCS5A01G346800.1	Wheat	plastid	44.42	38.56
Bra012478.1-P	Field mustard	mitochondrion	28.98	37.77
Zm00001d021453_P002	Maize	plastid	44.89	36.14
HORVU5Hr1G086370.1	Barley	nucleus, plastid	45.37	34.98
Bra036745.1-P	Field mustard	nucleus	35.15	26.15
Bra035204.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	9.98	24.28
Bra006177.1-P	Field mustard	mitochondrion	18.76	22.44
Bra011340.1-P	Field mustard	nucleus	4.75	21.28
Bra008502.1-P	Field mustard	nucleus	19.0	21.11
Bra018962.1-P	Field mustard	extracellular, vacuole	17.81	21.07
Bra021112.1-P	Field mustard	nucleus	11.64	20.5
Bra027239.1-P	Field mustard	plastid	12.11	20.16
Bra019826.1-P	Field mustard	mitochondrion	20.9	17.81
Bra013184.1-P	Field mustard	mitochondrion	9.98	17.36
Bra039012.1-P	Field mustard	mitochondrion	33.25	15.27
Bra011109.1-P	Field mustard	mitochondrion	32.3	14.78
Bra030391.1-P	Field mustard	nucleus	15.44	13.0
Bra016733.1-P	Field mustard	mitochondrion	19.95	11.24

Protein Annotations

EnsemblPlants:Bra010522.1	EnsemblPlants:Bra010522.1-P	EnsemblPlantsGene:Bra010522	Gene3D:1.20.1260.60	GO:GO:0006810	GO:GO:0008150
GO:GO:0015031	InterPro:Ist1	PANTHER:PTHR12161	PANTHER:PTHR12161:SF19	PFAM:PF03398	SEG:seg
UniParc:UPI0002545E26	UniProt:M4D222	MapMan:35.2	:	:	:

Description

AT4G35730 (E=3e-103) | unknown protein

Coordinates

chrA08:-:14971937..14973738

Molecular Weight (calculated)

47086.1 Da

IEP (calculated)

8.081

GRAVY (calculated)

-0.552

Length

421 amino acids

Sequence
(BLAST)

001: MTAAGVASEK TKKLFKLSLS LFRLGFNSSK CKTAAKMAVA RIKLLRNKRQ VVVKKMRRDI ALLLQSGQDA TARIRVEHVI REQNILAANE IIELFCELIV
101: SRLAIITKQK ECPVDLKEGI ASLIFAAPRC SEIPELGDLK DIFEKKYGRD FVSAAIELRP TCGVNRMLVV KLSVTRPEGE FKLKVMKEIA KEFQVDWDTK
201: ETELELLKPQ EETIDGPRAF VSASSLPVER ASQDPIDPSI NTHYHGTESA AEAAAELAKQ AVEAAQVAAL LAKRRDNSTK EDHYHLGSTR HSLDSETSSY
301: YAKPYVRRHS CNNPCVNESD HKEESEAKEA VRRRHSYNSP PLPPPATSEI KFDESDYEEE TEPEEGLLQS RASSLPPNRA PPQAPQSRRD SSGHQVHPKL
401: PDYDTLAARF EAIRHSKGPL I

Best Arabidopsis Sequence Match ( AT4G35730.1 )
(BLAST)

001: MTAAEVASAQ TKKLMKFSLS LFRRGFNSSK CKTAAKMAVA RIKLIRNKRL VVVKQMRRDI AVLLQSGQDA TARIRVEHVI REQNIQAANE IIELFCELIV
101: SRLTIITKQK QCPVDLKEGI ASLIFAAPRC SEIPELGDLR DIFAKKYGKD FVSAATDLRP SCGVNRMLID KLSVRNPGGE YKLKIMKEIA KEFQVDWDTT
201: ETEQELLKPQ EESIDGPRKF VSASSLPVNR AAINEPIDPT KAVPRSTSSM SINTHYHDTE SAAEAATELA KQAVAAAQVA SLLATRRDSS NKEFSVSSDH
301: STHQKDSQYM DHHHHHPGSR RQSRDSETSS YYAKPGAENR GMGRRHSYNN PGINESDYEE EYTNTEAEAK ETMRRRHSYN PRSVPPPATS EIKFDESDYY
401: EEETEPDEPS QGRVSSLPPN RAPPQAPQSG ESRQDSSGHQ VHPKLPDYDI LAARFEAIRH SKGPLI

Arabidopsis Description

Regulator of Vps4 activity in the MVB pathway protein [Source:UniProtKB/TrEMBL;Acc:F4JNS8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.