CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 3
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra010522.1-P	Field mustard	plastid	99.52	98.1
CDY41639	Canola	plastid	95.42	92.09
CDX75521	Canola	plastid	85.3	81.76
CDX69159	Canola	plastid	85.3	80.45
AT4G35730.1	Thale cress	plastid	83.86	74.68
VIT_00s1235g00010.t01	Wine grape	mitochondrion	52.05	62.07
KRH07948	Soybean	mitochondrion	60.96	57.37
KRH69704	Soybean	mitochondrion	60.24	57.08
VIT_00s0302g00010.t01	Wine grape	endoplasmic reticulum	44.58	51.25
PGSC0003DMT400003908	Potato	plastid	57.35	48.67
CDY04642	Canola	cytosol	16.87	46.67
Solyc02g083130.2.1	Tomato	plastid	57.11	43.65
Os09t0547200-01	Rice	mitochondrion	45.78	39.92
EER99304	Sorghum	plastid	46.02	39.79
GSMUA_Achr3P26880_001	Banana	mitochondrion	40.96	39.35
TraesCS5D01G353300.1	Wheat	mitochondrion	45.06	38.8
TraesCS5B01G347800.1	Wheat	mitochondrion	45.06	38.64
TraesCS5A01G346800.1	Wheat	plastid	44.82	38.35
CDY58595	Canola	mitochondrion	29.4	37.77
CDY53122	Canola	mitochondrion	29.4	37.77
Zm00001d021453_P002	Maize	plastid	45.54	36.14
HORVU5Hr1G086370.1	Barley	nucleus, plastid	45.78	34.8
CDX87282	Canola	cytosol	13.73	28.22
CDY46461	Canola	cytosol, mitochondrion, nucleus	35.66	26.15
CDX91784	Canola	nucleus	36.14	25.86
CDY48635	Canola	cytosol	20.24	25.07
CDY49898	Canola	mitochondrion	16.14	24.45
CDX87899	Canola	nucleus	16.14	24.28
CDY52976	Canola	mitochondrion	18.07	24.27
CDY22873	Canola	mitochondrion	19.52	22.63
CDX87900	Canola	mitochondrion	15.66	22.57
CDX78503	Canola	mitochondrion	19.04	22.44
CDY49897	Canola	nucleus	14.46	22.39
CDY33850	Canola	mitochondrion	19.52	22.31
CDY21093	Canola	mitochondrion	20.24	21.27
CDY21843	Canola	nucleus	12.53	21.22
CDY37561	Canola	nucleus	19.28	21.22
CDY41108	Canola	nucleus	19.28	21.16
CDY19375	Canola	mitochondrion	20.72	21.08
CDY20110	Canola	nucleus	12.05	20.92
CDX70491	Canola	mitochondrion	18.8	20.58
CDY50176	Canola	mitochondrion	19.52	20.56
CDX98558	Canola	plastid	12.29	19.77
CDX97673	Canola	plastid	12.29	19.77
CDY15051	Canola	cytosol	7.71	18.08
CDX93076	Canola	mitochondrion	10.12	17.36
CDY35879	Canola	mitochondrion	33.73	15.27
CDX82713	Canola	mitochondrion	33.49	15.13
CDY43502	Canola	mitochondrion	33.25	14.76
CDX75238	Canola	nucleus	20.48	13.47
CDX68838	Canola	nucleus	20.24	13.33

Protein Annotations

EnsemblPlants:CDY69937	EnsemblPlantsGene:GSBRNA2T00093662001	Gene3D:1.20.1260.60	GO:GO:0006810	GO:GO:0008150	GO:GO:0015031
InterPro:Ist1	PANTHER:PTHR12161	PANTHER:PTHR12161:SF19	PFAM:PF03398	ProteinID:CDY69937	ProteinID:CDY69937.1
SEG:seg	UniParc:UPI0004EEF7AD	UniProt:A0A078JWJ8	MapMan:35.2	:	:

Description

BnaAnng32080DBnaAnng32080D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JWJ8]

Coordinates

chrLK040725:-:58..1912

Molecular Weight (calculated)

46478.2 Da

IEP (calculated)

7.594

GRAVY (calculated)

-0.576

Length

415 amino acids

Sequence
(BLAST)

001: MTAAGVASEK TKKLFKLSLS LFRLGFNSSK CKTAAKMAVA RIKLLRNKRQ VVVKQMRRDI ALLLQSGQDA TARIRVEHVI REQNILAANE IIELFCELIV
101: SRLAIITKQK ECPVDLKEGI ASLIFAAPRC SEIPELGDLK DIFEKKYGRD FVSAATELRP TCGVNRMLVV KLSVTRPEGE FKLKVMKEIA KEFQVDWDTK
201: ETELELLKPQ EETIDGPRAF VSASSLPVER ASQDPIDPSI NTHYHGTESA AEAAAELAKQ AVEAAQVAAL LAKRRDNSTK EDHYHLGSTR HSLDSETSSY
301: YAKPYVRRHS CNNPCVNESD HKEESEAKEA VRRRHSYNSP PLPPPATSEI KFDESDYEEE TEPEEGLLQS RASSLPPNRA PPQAPQSRRD SSGHQVHPKL
401: PDYDTLAARF EAIRH

Best Arabidopsis Sequence Match ( AT4G35730.1 )
(BLAST)

001: MTAAEVASAQ TKKLMKFSLS LFRRGFNSSK CKTAAKMAVA RIKLIRNKRL VVVKQMRRDI AVLLQSGQDA TARIRVEHVI REQNIQAANE IIELFCELIV
101: SRLTIITKQK QCPVDLKEGI ASLIFAAPRC SEIPELGDLR DIFAKKYGKD FVSAATDLRP SCGVNRMLID KLSVRNPGGE YKLKIMKEIA KEFQVDWDTT
201: ETEQELLKPQ EESIDGPRKF VSASSLPVNR AAINEPIDPT KAVPRSTSSM SINTHYHDTE SAAEAATELA KQAVAAAQVA SLLATRRDSS NKEFSVSSDH
301: STHQKDSQYM DHHHHHPGSR RQSRDSETSS YYAKPGAENR GMGRRHSYNN PGINESDYEE EYTNTEAEAK ETMRRRHSYN PRSVPPPATS EIKFDESDYY
401: EEETEPDEPS QGRVSSLPPN RAPPQAPQSG ESRQDSSGHQ VHPKLPDYDI LAARFEAIRH SKGPLI

Arabidopsis Description

Regulator of Vps4 activity in the MVB pathway protein [Source:UniProtKB/TrEMBL;Acc:F4JNS8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.