CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 5
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH07948	Soybean	mitochondrion	89.73	89.12
VIT_00s1235g00010.t01	Wine grape	mitochondrion	54.34	68.39
VIT_00s0302g00010.t01	Wine grape	endoplasmic reticulum	50.23	60.94
CDY69937	Canola	plastid	57.08	60.24
Bra010522.1-P	Field mustard	plastid	57.08	59.38
CDX75521	Canola	plastid	57.53	58.2
CDY41639	Canola	plastid	57.08	58.14
Bra011633.1-P	Field mustard	mitochondrion, plastid	57.53	57.93
CDX69159	Canola	plastid	57.76	57.5
AT4G35730.1	Thale cress	plastid	58.68	55.15
PGSC0003DMT400003908	Potato	plastid	57.31	51.33
Solyc02g083130.2.1	Tomato	plastid	55.71	44.94
EER99304	Sorghum	plastid	47.95	43.75
Os09t0547200-01	Rice	mitochondrion	45.21	41.6
TraesCS5D01G353300.1	Wheat	mitochondrion	45.21	41.08
GSMUA_Achr3P26880_001	Banana	mitochondrion	40.41	40.97
TraesCS5B01G347800.1	Wheat	mitochondrion	45.21	40.91
TraesCS5A01G346800.1	Wheat	plastid	44.52	40.21
KRH35947	Soybean	mitochondrion	29.22	39.51
KRG90825	Soybean	mitochondrion	28.77	38.89
Zm00001d021453_P002	Maize	plastid	46.35	38.81
HORVU5Hr1G086370.1	Barley	nucleus, plastid	44.98	36.08
KRH35011	Soybean	mitochondrion	30.14	33.93
KRG89505	Soybean	mitochondrion	13.93	32.28
KRH06586	Soybean	cytosol	4.34	31.15
KRH08570	Soybean	nucleus	35.84	29.73
KRH70215	Soybean	nucleus	35.84	29.24
KRH26063	Soybean	cytosol	12.33	25.84
KRH45249	Soybean	mitochondrion	23.29	25.76
KRH60150	Soybean	cytosol, mitochondrion, nucleus, plastid	34.02	25.65
KRH55350	Soybean	extracellular	11.87	25.49
KRH75395	Soybean	mitochondrion	22.83	24.81
KRH47048	Soybean	mitochondrion	18.72	21.47
KRH46919	Soybean	mitochondrion	20.09	21.46
KRH44367	Soybean	mitochondrion	15.75	21.43
KRH01764	Soybean	mitochondrion	21.23	21.04
KRH23458	Soybean	mitochondrion	18.72	20.55
KRH41442	Soybean	cytosol	20.55	20.18
KRH70127	Soybean	mitochondrion, nucleus	14.84	17.11
KRH49036	Soybean	mitochondrion	37.21	15.48
KRH22410	Soybean	mitochondrion, nucleus	23.52	15.47
KRH74171	Soybean	mitochondrion	36.99	15.23
KRH26928	Soybean	nucleus	22.6	14.93
KRH48400	Soybean	mitochondrion, nucleus	21.0	12.52
KRH39280	Soybean	mitochondrion, nucleus	20.55	12.24
KRH60286	Soybean	nucleus	19.41	11.1
KRH41578	Soybean	nucleus	19.18	10.53

Protein Annotations

EMBL:ACUP02000728	EnsemblPlants:KRH69704	EnsemblPlantsGene:GLYMA_02G043200	EntrezGene:100814817	Gene3D:1.20.1260.60	GO:GO:0006810
GO:GO:0008150	GO:GO:0015031	InterPro:Ist1	ncoils:Coil	PANTHER:PTHR12161	PANTHER:PTHR12161:SF19
PFAM:PF03398	ProteinID:KRH69704	ProteinID:KRH69704.1	SEG:seg	UniParc:UPI0002336F4B	UniProt:I1JCC3
MapMan:35.2	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:4036980..4040318

Molecular Weight (calculated)

48645.2 Da

IEP (calculated)

8.611

GRAVY (calculated)

-0.504

Length

438 amino acids

Sequence
(BLAST)

001: MTVASTKRLF KITLSLLRLG FNSSKCKTAA KMAVARIKLL RNKREVVVRQ MRRDIALLLQ SGQDATARIR VEHVMREQNV LAANEFIELF CELVVARLAI
101: ISKQKECPAD LKEGIASLIF AAPRCSEIPE LVALKNIFEK KYGKDFVSAA VDLRPSCGVN RQLIEKLSVR TPPGEVKLKV LKEIAKEHHI DWDTTDSEKE
201: LLKPPEELIV GPSAFVSASS LPVKPSTVMS VDSNKPATRL SRGGKPDAEH YKDSKSAAEA AAEAAKQAIA AAEVAAYMAM KDYNNEAPQP YAYNDKLYNS
301: GVNSGTFQSN NPAKCTLNMT PKSLTEEKMY RSQSLPRSDH MNNEEDALPN QYGGNDYRRH SYHPASAHSD IKFDESSCDE EIEAEEPPPV TMPPNRLPPP
401: VPSSLAKQES HIRVHPKLPD YDELAARFDA LKFKKSQS

Best Arabidopsis Sequence Match ( AT4G35730.1 )
(BLAST)

001: MTAAEVASAQ TKKLMKFSLS LFRRGFNSSK CKTAAKMAVA RIKLIRNKRL VVVKQMRRDI AVLLQSGQDA TARIRVEHVI REQNIQAANE IIELFCELIV
101: SRLTIITKQK QCPVDLKEGI ASLIFAAPRC SEIPELGDLR DIFAKKYGKD FVSAATDLRP SCGVNRMLID KLSVRNPGGE YKLKIMKEIA KEFQVDWDTT
201: ETEQELLKPQ EESIDGPRKF VSASSLPVNR AAINEPIDPT KAVPRSTSSM SINTHYHDTE SAAEAATELA KQAVAAAQVA SLLATRRDSS NKEFSVSSDH
301: STHQKDSQYM DHHHHHPGSR RQSRDSETSS YYAKPGAENR GMGRRHSYNN PGINESDYEE EYTNTEAEAK ETMRRRHSYN PRSVPPPATS EIKFDESDYY
401: EEETEPDEPS QGRVSSLPPN RAPPQAPQSG ESRQDSSGHQ VHPKLPDYDI LAARFEAIRH SKGPLI

Arabidopsis Description

Regulator of Vps4 activity in the MVB pathway protein [Source:UniProtKB/TrEMBL;Acc:F4JNS8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.