CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
mitochondrion 2
cytosol 1
nucleus 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH22410	Soybean	mitochondrion, nucleus	90.35	89.94
VIT_12s0059g01700.t01	Wine grape	golgi	21.72	61.8
KRH70127	Soybean	mitochondrion, nucleus	30.02	52.37
CDX78503	Canola	mitochondrion	21.27	40.06
Bra006177.1-P	Field mustard	mitochondrion	20.97	39.49
CDY22873	Canola	mitochondrion	21.27	39.39
AT2G14830.1	Thale cress	mitochondrion	22.62	39.06
Solyc12g010700.1.1	Tomato	cytosol	26.24	38.41
CDY33850	Canola	mitochondrion	20.97	38.29
CDX70491	Canola	mitochondrion	21.42	37.47
KRH26063	Soybean	cytosol	11.46	36.36
PGSC0003DMT400020212	Potato	cytosol	20.66	34.68
KRH55350	Soybean	extracellular	10.56	34.31
KRH06586	Soybean	cytosol	3.02	32.79
PGSC0003DMT400047266	Potato	nucleus	25.49	31.07
KRG89505	Soybean	mitochondrion	8.45	29.63
Solyc07g054230.2.1	Tomato	nucleus	16.74	24.72
KRH47048	Soybean	mitochondrion	13.27	23.04
KRH69704	Soybean	mitochondrion	14.93	22.6
KRH07948	Soybean	mitochondrion	14.93	22.45
KRH23458	Soybean	mitochondrion	12.97	21.55
KRH35011	Soybean	mitochondrion	12.37	21.08
KRG90825	Soybean	mitochondrion	10.26	20.99
KRH35947	Soybean	mitochondrion	10.11	20.68
KRH44367	Soybean	mitochondrion	9.95	20.5
KRH45249	Soybean	mitochondrion	12.22	20.45
KRH60150	Soybean	cytosol, mitochondrion, nucleus, plastid	17.65	20.14
KRH08570	Soybean	nucleus	15.84	19.89
KRH75395	Soybean	mitochondrion	11.92	19.6
KRH70215	Soybean	nucleus	15.54	19.18
AT1G51900.1	Thale cress	mitochondrion	20.81	17.83
KRH41442	Soybean	cytosol	10.86	16.14
KRH46919	Soybean	mitochondrion	9.65	15.61
KRH01764	Soybean	mitochondrion	10.26	15.38
KRH48400	Soybean	mitochondrion, nucleus	16.14	14.56
KRH39280	Soybean	mitochondrion, nucleus	15.84	14.29
KRH60286	Soybean	nucleus	16.44	14.23
KRH41578	Soybean	nucleus	15.69	13.03
KRH49036	Soybean	mitochondrion	19.31	12.16
KRH74171	Soybean	mitochondrion	19.46	12.12

Protein Annotations

EMBL:ACUP02007760	EnsemblPlants:KRH26928	EnsemblPlantsGene:GLYMA_12G203000	EntrezGene:102669589	Gene3D:1.20.1260.60	GO:GO:0006810
GO:GO:0008150	GO:GO:0015031	InterPro:Ist1	ncoils:Coil	PANTHER:PTHR12161	PANTHER:PTHR12161:SF18
PFAM:PF03398	ProteinID:KRH26928	ProteinID:KRH26928.1	SEG:seg	UniParc:UPI00023D0B04	UniProt:I1LUF3
MapMan:35.2	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr12:+:36340055..36343868

Molecular Weight (calculated)

75784.6 Da

IEP (calculated)

7.999

GRAVY (calculated)

-0.765

Length

663 amino acids

Sequence
(BLAST)

001: MFDIFFGWSK ASKCKKAIKR ARCRLRLLKN KRQAIARQLR KDLAELIQSG HEETAFNRVE QLMGDESLAA AYELLDHFCE FILTELSYIR RHKDCPNDIN
101: EAVSSLIFAS ARCGDLPELG VIRKLFGQRY GERFATTAVE LSPGNLVNKK LKENLSAKSV PDDMKYRMVD EIARDNCLQQ QVLAIQYYPD WQQVQEKENK
201: GYQLVESDAK IIDTIGGSKV QPSEIKRDVR CVTISKPSDS CSLPESSLAD TSAMVSAVQQ YPPYFLRYPM EKKVVEIDFP DLLSSINFDL QNKGERMALI
301: SSAQRVSFPP CSEEMVDYVD DIKEFSVPNN AACQDQMLFK FRSSGLSRRE KTQFDFDDSE MGQDGSESEN SSTRTSTKSK RRPEKKSRRR SSSMENLGLM
401: DIGYVIYYHK PCKSPLAQKH RSRKHHKPSL EGISPSSYGQ KRLMLHGFSE EGNVLQSSHS QDGTRRKLFN FKMSGCSLDQ PCYFCVYDDE DYLEAQSMKQ
501: KRGIRATHVQ QGVLHDECCC CQPFWDDELN QGIELVTIPQ RPNRRNYSAS AEYHVFNYTD CQAGNGNNET KEEISASPKV SNPRTGGSSP IIETEATYSR
601: AMTMPQERHR NNKDKMLRTY SCPSPHPSHV HPKLPDYDDI AAKFTALKRE RMENMDCSKD QNK

Best Arabidopsis Sequence Match ( AT2G14830.1 )
(BLAST)

001: MFCFLFGWRR TSKCKSVVKQ LQCRLNLLKN KKYAISSHLR NDIAQLLRIG ERDRALHRAQ QLFLDENLMS LYHLLLHFSD IILLNLSYIR RRRDLPDGIN
101: EAVSTLVFAS ARCGDLPELR ALRVLFGKRY GNHFVDTALN LLPGNCVNPQ VIEKLSIISV SDDAKSKLLG EIVEEYNLRL EVLAIEYTPE FHKQVLKSEK
201: AEEEKEVMSS NSAQPYCSSQ KAESEAEVYK FTLTDADIEE NQEQERKVCD EEDDCIEEEV VEEDQSVFRF RESTEDERKE RKRLRRKPRS TSSSSSPIAK
301: DVDCWRYYYK GKRSRQRKEC GKCCYHIVYN VFTMLPDQKE SEEGERSFKK AMHVHPKLPD YDQIVAHFTA LRKQQQQKQK HMRS

Arabidopsis Description

Regulator of Vps4 activity in the MVB pathway protein [Source:TAIR;Acc:AT2G14830]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.