Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 5
- nucleus 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX78503 | Canola | mitochondrion | 65.1 | 71.02 |
| Bra006177.1-P | Field mustard | mitochondrion | 64.58 | 70.45 |
| CDX70491 | Canola | mitochondrion | 65.62 | 66.49 |
| VIT_12s0059g01700.t01 | Wine grape | golgi | 29.17 | 48.07 |
| Solyc12g010700.1.1 | Tomato | cytosol | 34.64 | 29.36 |
| AT3G15490.1 | Thale cress | mitochondrion, nucleus | 14.32 | 26.07 |
| KRH70127 | Soybean | mitochondrion, nucleus | 25.0 | 25.26 |
| PGSC0003DMT400020212 | Potato | cytosol | 25.52 | 24.81 |
| KRH26928 | Soybean | nucleus | 39.06 | 22.62 |
| KRH22410 | Soybean | mitochondrion, nucleus | 39.06 | 22.52 |
| AT1G79910.1 | Thale cress | nucleus | 21.61 | 21.78 |
| AT1G25420.1 | Thale cress | mitochondrion | 16.93 | 20.12 |
| AT1G52315.1 | Thale cress | mitochondrion | 17.97 | 19.88 |
| PGSC0003DMT400047266 | Potato | nucleus | 27.34 | 19.3 |
| AT1G51900.1 | Thale cress | mitochondrion | 36.46 | 18.09 |
| AT4G35730.1 | Thale cress | plastid | 20.83 | 17.17 |
| AT1G13340.1 | Thale cress | mitochondrion | 16.15 | 15.16 |
| Solyc07g054230.2.1 | Tomato | nucleus | 15.36 | 13.14 |
| AT1G34220.1 | Thale cress | nucleus | 19.01 | 11.25 |
| AT4G32350.1 | Thale cress | nucleus | 21.09 | 11.07 |
| AT2G19710.1 | Thale cress | mitochondrion, nucleus | 18.75 | 7.68 |
| AT4G29440.1 | Thale cress | mitochondrion | 19.27 | 6.79 |
Protein Annotations
| Gene3D:1.20.1260.60 | EntrezGene:28718274 | MapMan:35.2 | UniProt:A0A178VX54 | ProteinID:AEC06337.2 | ArrayExpress:AT2G14830 |
| EnsemblPlantsGene:AT2G14830 | RefSeq:AT2G14830 | TAIR:AT2G14830 | RefSeq:AT2G14830-TAIR-G | EnsemblPlants:AT2G14830.1 | TAIR:AT2G14830.1 |
| UniProt:F4IHD7 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015031 | InterPro:Ist1 | RefSeq:NP_179090.2 |
| ProteinID:OAP10927.1 | PFAM:PF03398 | PO:PO:0000084 | PO:PO:0000293 | PANTHER:PTHR12161 | PANTHER:PTHR12161:SF18 |
| UniParc:UPI0007DF9F16 | SEG:seg | : | : | : | : |
Description
Regulator of Vps4 activity in the MVB pathway protein [Source:TAIR;Acc:AT2G14830]
Coordinates
chr2:+:6364378..6365818
Molecular Weight (calculated)
45046.8 Da
IEP (calculated)
8.157
GRAVY (calculated)
-0.706
Length
384 amino acids
Sequence
(BLAST)
(BLAST)
001: MFCFLFGWRR TSKCKSVVKQ LQCRLNLLKN KKYAISSHLR NDIAQLLRIG ERDRALHRAQ QLFLDENLMS LYHLLLHFSD IILLNLSYIR RRRDLPDGIN
101: EAVSTLVFAS ARCGDLPELR ALRVLFGKRY GNHFVDTALN LLPGNCVNPQ VIEKLSIISV SDDAKSKLLG EIVEEYNLRL EVLAIEYTPE FHKQVLKSEK
201: AEEEKEVMSS NSAQPYCSSQ KAESEAEVYK FTLTDADIEE NQEQERKVCD EEDDCIEEEV VEEDQSVFRF RESTEDERKE RKRLRRKPRS TSSSSSPIAK
301: DVDCWRYYYK GKRSRQRKEC GKCCYHIVYN VFTMLPDQKE SEEGERSFKK AMHVHPKLPD YDQIVAHFTA LRKQQQQKQK HMRS
101: EAVSTLVFAS ARCGDLPELR ALRVLFGKRY GNHFVDTALN LLPGNCVNPQ VIEKLSIISV SDDAKSKLLG EIVEEYNLRL EVLAIEYTPE FHKQVLKSEK
201: AEEEKEVMSS NSAQPYCSSQ KAESEAEVYK FTLTDADIEE NQEQERKVCD EEDDCIEEEV VEEDQSVFRF RESTEDERKE RKRLRRKPRS TSSSSSPIAK
301: DVDCWRYYYK GKRSRQRKEC GKCCYHIVYN VFTMLPDQKE SEEGERSFKK AMHVHPKLPD YDQIVAHFTA LRKQQQQKQK HMRS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.