Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 5
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY04642 | Canola | cytosol | 11.38 | 82.67 |
| Bra011109.1-P | Field mustard | mitochondrion | 62.11 | 73.59 |
| CDY43502 | Canola | mitochondrion | 61.83 | 72.09 |
| Zm00001d028142_P001 | Maize | cytosol | 5.05 | 55.0 |
| Zm00001d048482_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 4.95 | 54.0 |
| AT2G19710.1 | Thale cress | mitochondrion, nucleus | 44.68 | 51.97 |
| KRH60150 | Soybean | cytosol, mitochondrion, nucleus, plastid | 17.34 | 32.53 |
| AT1G25420.1 | Thale cress | mitochondrion | 9.45 | 31.89 |
| AT4G35730.1 | Thale cress | plastid | 13.12 | 30.69 |
| KRH41442 | Soybean | cytosol | 11.38 | 27.8 |
| KRH49036 | Soybean | mitochondrion | 24.5 | 25.36 |
| KRH74171 | Soybean | mitochondrion | 24.4 | 25.0 |
| AT1G34220.1 | Thale cress | nucleus | 13.58 | 22.8 |
| AT1G13340.1 | Thale cress | mitochondrion | 8.44 | 22.49 |
| TraesCS3B01G284600.1 | Wheat | nucleus | 22.84 | 22.41 |
| Os01t0706400-01 | Rice | plasma membrane | 22.57 | 22.34 |
| TraesCS3D01G253500.1 | Wheat | nucleus | 22.66 | 22.11 |
| Solyc07g032230.2.1 | Tomato | nucleus | 21.74 | 22.09 |
| PGSC0003DMT400030456 | Potato | mitochondrion, nucleus, plastid | 21.83 | 21.94 |
| TraesCS3A01G252800.1 | Wheat | cytosol | 22.39 | 21.82 |
| TraesCS3B01G288900.2 | Wheat | plastid | 22.84 | 21.61 |
| HORVU3Hr1G066420.1 | Barley | nucleus | 23.03 | 21.22 |
| Zm00001d011684_P002 | Maize | nucleus, plastid | 21.93 | 19.74 |
| EES03498 | Sorghum | nucleus, plastid | 22.29 | 19.64 |
| GSMUA_Achr1P14380_001 | Banana | nucleus | 22.2 | 19.44 |
| AT2G14830.1 | Thale cress | mitochondrion | 6.79 | 19.27 |
| AT1G52315.1 | Thale cress | mitochondrion | 5.69 | 17.87 |
| AT3G15490.1 | Thale cress | mitochondrion, nucleus | 3.3 | 17.06 |
| AT1G79910.1 | Thale cress | nucleus | 5.96 | 17.06 |
| VIT_11s0016g02580.t01 | Wine grape | mitochondrion | 15.5 | 14.33 |
| AT4G32350.1 | Thale cress | nucleus | 7.52 | 11.2 |
| AT1G51900.1 | Thale cress | mitochondrion | 6.42 | 9.04 |
Protein Annotations
| Gene3D:1.20.1260.60 | MapMan:35.2 | EntrezGene:829065 | ProteinID:AEE85631.1 | ArrayExpress:AT4G29440 | EnsemblPlantsGene:AT4G29440 |
| RefSeq:AT4G29440 | TAIR:AT4G29440 | RefSeq:AT4G29440-TAIR-G | EnsemblPlants:AT4G29440.1 | TAIR:AT4G29440.1 | Unigene:At.27853 |
| ncoils:Coil | UniProt:F4JNM2 | GO:GO:0003674 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015031 |
| InterPro:Ist1 | RefSeq:NP_194673.2 | PFAM:PF03398 | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 |
| PO:PO:0025281 | PANTHER:PTHR12161 | PANTHER:PTHR12161:SF13 | UniParc:UPI0000196E41 | SEG:seg | : |
Description
Regulator of Vps4 activity in the MVB pathway protein [Source:UniProtKB/TrEMBL;Acc:F4JNM2]
Coordinates
chr4:-:14473757..14477963
Molecular Weight (calculated)
119296.0 Da
IEP (calculated)
6.831
GRAVY (calculated)
-0.958
Length
1090 amino acids
Sequence
(BLAST)
(BLAST)
0001: MKKVLHRSFK PAKCKIALQM AASRLKILKN KKDTQIKQLR RELAHLLESG QTQTAKIRVE HVVREEKTVA AYELVGIYCE LLVARLGVID SQKTCPNDLK
0101: EAVASVLYAS QRLTDVGELS DIVKHFSAKY GKDFVSAAIG LQPDSGVSRL LVEKLSVKAP DGPTKIKILT EIATQHNVTW EAESLVESDP KETMSASGAS
0201: SSVSQPATGI KSESSRIQNN QPPVFQAAAT VNVSQNSYAT DGRSSSRMTS TDFNVGKTPD HYHQDPKPSG DRVDGREHRD HNPGHGDTSP FETKFVDATS
0301: AARAAAESAE RASFAARRAA ELSSKERMMM MQNSTESRNS SSYENLRSNP PHSRTSSSNM QGGGFGKEEL LKSNNRQVDQ STTTTRAESS KKTVDELSEN
0401: TSWRRGHSRE NSLEMRPNDS FAKIGREKQQ PGMDDINLSS SADVLNKKQS SRASSHSPSS NFSDDNDVTA LDHIDSPSIF EENKFQSTVG DRESYNDSPV
0501: VVVAPAFDDY SSFFDKPQFD TEDAYHDEPE QGLGFSLLGS SSKTSDHMPT EISSWSLEGH KDLGKLSSAS TSQVLEKEKP SSPPTFDDGP TSPPASLHEP
0601: EPSAKFDDYD RDSESEEDNL GRLSGRAEGK SKLTAQKSHM SEGPDDLGRY FFPSDTEDQG DDSKTQEESD AETPTGLKFG PLASGLENET TLPSYGSSPP
0701: RDKTSSKSIK EYLPTEVDPS RSSSLQTASS SSIRNELYTQ KASNSDKRPS SIPPDSSSSD DESDMELPKR VSFRYQEKRT ESRTRPTHLH SGVSHKDLEE
0801: EIPTRASTRS QDRRTHKTTP ASASASYFHT MSSDDEDEKE VHRDTAHIQT RPYISISRRT KGQERRPSLV TAKIDKVSFD EESPPKLSPE AKPLTKQQGS
0901: ASSLSYLPKT EKVSHDQESH PKLGLGAKPL IKQQGSASSL SFLPKTNKAS PDQDSPPKLV PKEKPAAKQR GSASSLSFLP KTDKASPDQD SPPKLLPKEK
1001: PAAKQQGSAT SSSSLPKTEK ISHYRESPSK LTPEAKSMAK QEGLASSSSS LPKTVTSPDP ETPAKEKASH VHPKLPDYDD IFAKLGALRR
0101: EAVASVLYAS QRLTDVGELS DIVKHFSAKY GKDFVSAAIG LQPDSGVSRL LVEKLSVKAP DGPTKIKILT EIATQHNVTW EAESLVESDP KETMSASGAS
0201: SSVSQPATGI KSESSRIQNN QPPVFQAAAT VNVSQNSYAT DGRSSSRMTS TDFNVGKTPD HYHQDPKPSG DRVDGREHRD HNPGHGDTSP FETKFVDATS
0301: AARAAAESAE RASFAARRAA ELSSKERMMM MQNSTESRNS SSYENLRSNP PHSRTSSSNM QGGGFGKEEL LKSNNRQVDQ STTTTRAESS KKTVDELSEN
0401: TSWRRGHSRE NSLEMRPNDS FAKIGREKQQ PGMDDINLSS SADVLNKKQS SRASSHSPSS NFSDDNDVTA LDHIDSPSIF EENKFQSTVG DRESYNDSPV
0501: VVVAPAFDDY SSFFDKPQFD TEDAYHDEPE QGLGFSLLGS SSKTSDHMPT EISSWSLEGH KDLGKLSSAS TSQVLEKEKP SSPPTFDDGP TSPPASLHEP
0601: EPSAKFDDYD RDSESEEDNL GRLSGRAEGK SKLTAQKSHM SEGPDDLGRY FFPSDTEDQG DDSKTQEESD AETPTGLKFG PLASGLENET TLPSYGSSPP
0701: RDKTSSKSIK EYLPTEVDPS RSSSLQTASS SSIRNELYTQ KASNSDKRPS SIPPDSSSSD DESDMELPKR VSFRYQEKRT ESRTRPTHLH SGVSHKDLEE
0801: EIPTRASTRS QDRRTHKTTP ASASASYFHT MSSDDEDEKE VHRDTAHIQT RPYISISRRT KGQERRPSLV TAKIDKVSFD EESPPKLSPE AKPLTKQQGS
0901: ASSLSYLPKT EKVSHDQESH PKLGLGAKPL IKQQGSASSL SFLPKTNKAS PDQDSPPKLV PKEKPAAKQR GSASSLSFLP KTDKASPDQD SPPKLLPKEK
1001: PAAKQQGSAT SSSSLPKTEK ISHYRESPSK LTPEAKSMAK QEGLASSSSS LPKTVTSPDP ETPAKEKASH VHPKLPDYDD IFAKLGALRR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.