Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G284600.1 | Wheat | nucleus | 93.82 | 94.33 |
| TraesCS3A01G252800.1 | Wheat | cytosol | 93.2 | 93.11 |
| TraesCS3B01G288900.2 | Wheat | plastid | 94.36 | 91.49 |
| Zm00001d028142_P001 | Maize | cytosol | 7.79 | 87.0 |
| Zm00001d048482_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 7.7 | 86.0 |
| HORVU3Hr1G066420.1 | Barley | nucleus | 90.51 | 85.46 |
| Os01t0706400-01 | Rice | plasma membrane | 62.58 | 63.49 |
| CDY04642 | Canola | cytosol | 7.34 | 54.67 |
| EES03498 | Sorghum | nucleus, plastid | 58.01 | 52.38 |
| Zm00001d011684_P002 | Maize | nucleus, plastid | 55.6 | 51.28 |
| TraesCS3D01G263400.1 | Wheat | mitochondrion, plastid | 10.83 | 37.93 |
| TraesCS3D01G451700.1 | Wheat | cytosol | 14.77 | 32.23 |
| TraesCS5D01G353300.1 | Wheat | mitochondrion | 13.79 | 31.95 |
| TraesCS4D01G219500.2 | Wheat | mitochondrion | 5.19 | 31.52 |
| KRH60150 | Soybean | cytosol, mitochondrion, nucleus, plastid | 16.38 | 31.5 |
| CDY35879 | Canola | mitochondrion | 22.47 | 27.37 |
| Bra039012.1-P | Field mustard | mitochondrion | 22.47 | 27.37 |
| CDX82713 | Canola | mitochondrion | 22.47 | 27.31 |
| KRH49036 | Soybean | mitochondrion | 25.6 | 27.16 |
| AT2G19710.1 | Thale cress | mitochondrion, nucleus | 22.56 | 26.89 |
| KRH74171 | Soybean | mitochondrion | 25.6 | 26.88 |
| Bra011109.1-P | Field mustard | mitochondrion | 20.95 | 25.43 |
| PGSC0003DMT400030456 | Potato | mitochondrion, nucleus, plastid | 24.44 | 25.16 |
| KRH41442 | Soybean | cytosol | 10.03 | 25.11 |
| Solyc07g032230.2.1 | Tomato | nucleus | 24.08 | 25.07 |
| CDY43502 | Canola | mitochondrion | 20.86 | 24.92 |
| TraesCS4D01G044800.1 | Wheat | mitochondrion | 7.34 | 23.7 |
| TraesCS4D01G044400.1 | Wheat | mitochondrion | 7.43 | 23.58 |
| AT4G29440.1 | Thale cress | mitochondrion | 22.11 | 22.66 |
| GSMUA_Achr1P14380_001 | Banana | nucleus | 24.98 | 22.41 |
| TraesCS4D01G219800.1 | Wheat | mitochondrion | 5.55 | 22.06 |
| VIT_11s0016g02580.t01 | Wine grape | mitochondrion | 17.55 | 16.62 |
| TraesCS4D01G219400.3 | Wheat | mitochondrion, plastid | 7.79 | 16.11 |
| TraesCS6D01G122600.1 | Wheat | cytosol, nucleus, plastid | 8.59 | 13.43 |
| TraesCS7D01G433700.1 | Wheat | cytosol, mitochondrion, nucleus | 7.97 | 12.26 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G253500.1 | EnsemblPlantsGene:TraesCS3D01G253500 | Gene3D:1.20.1260.60 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015031 |
| InterPro:Ist1 | PANTHER:PTHR12161 | PANTHER:PTHR12161:SF13 | PFAM:PF03398 | SEG:seg | MapMan:35.2 |
Description
No Description!
Coordinates
chr3D:-:355163370..355168872
Molecular Weight (calculated)
123336.0 Da
IEP (calculated)
6.431
GRAVY (calculated)
-1.058
Length
1117 amino acids
Sequence
(BLAST)
(BLAST)
0001: MHRSKGKLSG VLSKGFKPDK CKIALKMAMA RIKLLRNKKE VQVRQMRREV AQLLDGNQDQ TARIRVEHVI REEKFMQAYD LIEVYCELIV ARMSIIDSQK
0101: TCPIDLKEAI ASVIFASMRC SDVTELADVR KNFTSKYGKE FATSALEVRP DSGVNRLVIE KLSAGAPDVQ TKTKTLSSIA AEHNIKWEPK AFEEQKQNED
0201: RMYGSTYSGG NIPTSGSPAS SVPTPQPAAA PYSSVQSATS RVPAGPSYES SEALANRNPH GTANSNASTQ ENRRGSDASV PPSSQHGATT YSSANIPGSN
0301: NYSNTGSSSV SRPHSQFGST VPDPISRTEE INQPRERKSS ASGSNWNVEF KDAASAAQAA ADSAEMASIA ARAAAQLASR GNFYADQGTG AYESAAYMND
0401: TTPRKQQAGH LMKDGKSFNE QSSGINDPRM ISSNARKDVE RAETNRVSSQ NMSTPYSSQL HSYAPESHTD MHDMPTEPHH AHSSEPPYFN DSSEPPYFDD
0501: SSEKESNIRR AEDHQFDLHE ERLPDAGFDW HHTKDIGSRQ ASFDEESRNN HYSNFSASHG GRSASWDNQN DKAGADSSAV LFDQYDYDVQ EENLLDHFSS
0601: KHTEELLTMQ DHKGFSSADW SQQPRSESPV DRSTSTLFSQ PSYDLGANKE DIPLNDTRPP TFDSDGVSSD EETSTDMHIL RTHSRGSDYS ENKMFNKNSG
0701: KFVPAVIEDH ESRPSKHYQN PPGSDVFRKE QNSDGSPRYD YSGARGNLGR VQSRDYDLSE EETEPHRLEG TSSGITGANE NRPSPFRMQT SATSDDSDDG
0801: DLGLNYGRLT PGLRNKLRQR PQYKISGDNL LRKQSLEGAS ASIEESVHFK ENDTSSEQTG DTPKGSRTTK NSFGANYHSE HLDGRHTVGK PVESRSSMTR
0901: NDFYSGDTGK LSERSGSPIS SPTKTSVREN SIQEPHLERP GSGVRRESRS RTARTFFDSD ESEEELEGRR SGRTKLSKEQ IQSRRTREVA PDTKRDGRAR
1001: AGAQYAVETE STPKSPAKAF SNSSTEQRKA APPYFRVSVQ QSSPNPVHIE PPAARGKWQE DEPEGSSSPE NEGNKETSAE TLKVSTPTAG PAHVHPKLPT
1101: DYDSFAAHFK SLRTNRR
0101: TCPIDLKEAI ASVIFASMRC SDVTELADVR KNFTSKYGKE FATSALEVRP DSGVNRLVIE KLSAGAPDVQ TKTKTLSSIA AEHNIKWEPK AFEEQKQNED
0201: RMYGSTYSGG NIPTSGSPAS SVPTPQPAAA PYSSVQSATS RVPAGPSYES SEALANRNPH GTANSNASTQ ENRRGSDASV PPSSQHGATT YSSANIPGSN
0301: NYSNTGSSSV SRPHSQFGST VPDPISRTEE INQPRERKSS ASGSNWNVEF KDAASAAQAA ADSAEMASIA ARAAAQLASR GNFYADQGTG AYESAAYMND
0401: TTPRKQQAGH LMKDGKSFNE QSSGINDPRM ISSNARKDVE RAETNRVSSQ NMSTPYSSQL HSYAPESHTD MHDMPTEPHH AHSSEPPYFN DSSEPPYFDD
0501: SSEKESNIRR AEDHQFDLHE ERLPDAGFDW HHTKDIGSRQ ASFDEESRNN HYSNFSASHG GRSASWDNQN DKAGADSSAV LFDQYDYDVQ EENLLDHFSS
0601: KHTEELLTMQ DHKGFSSADW SQQPRSESPV DRSTSTLFSQ PSYDLGANKE DIPLNDTRPP TFDSDGVSSD EETSTDMHIL RTHSRGSDYS ENKMFNKNSG
0701: KFVPAVIEDH ESRPSKHYQN PPGSDVFRKE QNSDGSPRYD YSGARGNLGR VQSRDYDLSE EETEPHRLEG TSSGITGANE NRPSPFRMQT SATSDDSDDG
0801: DLGLNYGRLT PGLRNKLRQR PQYKISGDNL LRKQSLEGAS ASIEESVHFK ENDTSSEQTG DTPKGSRTTK NSFGANYHSE HLDGRHTVGK PVESRSSMTR
0901: NDFYSGDTGK LSERSGSPIS SPTKTSVREN SIQEPHLERP GSGVRRESRS RTARTFFDSD ESEEELEGRR SGRTKLSKEQ IQSRRTREVA PDTKRDGRAR
1001: AGAQYAVETE STPKSPAKAF SNSSTEQRKA APPYFRVSVQ QSSPNPVHIE PPAARGKWQE DEPEGSSSPE NEGNKETSAE TLKVSTPTAG PAHVHPKLPT
1101: DYDSFAAHFK SLRTNRR
001: MKKVLQRGFK PAKCKTALQM ANSRLKILKN KKEIQIKQLR RELAQLLESG QTPTARIRVE HVVREEKTVA AYELIGIYCE LLVVRLGVIE SQKNCPIDLK
101: EAVTSVLFAS QRLSDVPELS EIFKQFTTKY GKDFSTSAVE LRPDSGVSRL LVEKLSAKAP DGPTKVKILM AIAEEHNVVW EAQSFVESDP KDTELLNGAN
201: SFQPASSMNM DSSINSNKEQ PPNIHAPATV NAHHGSSERH HSPENSYANG GRSSSRSNNV TSGKADDYYH SKARPSRSRP DEGECRNPNH GYENSSSRNK
301: QKWEPEFVDS TDAARAAAEA AERASFAARA AAELSNKERM TRQDSTQSHI SSASVNLRNE PSHRRDRSNA QRESFSEDHV SPRRNVRMQY EDMDRTRQDR
401: YDRAEQIPPV DQPSGRHSVD NSRNNGSFGR EKQPSQDETD INVGYSEDVH LRKQSSRVSS HSHSSNYSDE NDLGSDFMKS PSIVEENIFA TEYDHQSQSS
501: FKDIDSHDHG HDDDAAATDN YDDYSSFFYQ PKFHAEDNHY QDEIDHGVGF SLLGSKTSAS AASWSFKGDH SKSHGKHSSS SSQVFQENPS SRLFDDVSTS
601: PPASYHEPDP HAKFDNYGPN SESDGDQPID KVSGDVHERG NLTSDRSHKF KVSDSAGHEV FPLDTEEHTD NSRTREESDS DSEPQLGLRL GALAGGFRNK
701: KTLPPYRMSS ASSKAEKEYI QIDDFGQSSR KDLYSKKASN TETRPSFMPP HPSSSDEDDS DMQHPGRTET KSDSLYSHSR VNHDDSEEEK LPTRSSSRIQ
801: ERSHKPSTGI RVQKRTNFKM PVSASSEDEE EVEREAARIN AKPNKTTGYG FSLRTKGQSK ANEKHSLPVT TKKTDKESHD QPSPRTVTSS HVPQTVKSPD
901: PDTPSRERER ASHVHPNLPE YDDIFARLGA LRAPSRR
101: EAVTSVLFAS QRLSDVPELS EIFKQFTTKY GKDFSTSAVE LRPDSGVSRL LVEKLSAKAP DGPTKVKILM AIAEEHNVVW EAQSFVESDP KDTELLNGAN
201: SFQPASSMNM DSSINSNKEQ PPNIHAPATV NAHHGSSERH HSPENSYANG GRSSSRSNNV TSGKADDYYH SKARPSRSRP DEGECRNPNH GYENSSSRNK
301: QKWEPEFVDS TDAARAAAEA AERASFAARA AAELSNKERM TRQDSTQSHI SSASVNLRNE PSHRRDRSNA QRESFSEDHV SPRRNVRMQY EDMDRTRQDR
401: YDRAEQIPPV DQPSGRHSVD NSRNNGSFGR EKQPSQDETD INVGYSEDVH LRKQSSRVSS HSHSSNYSDE NDLGSDFMKS PSIVEENIFA TEYDHQSQSS
501: FKDIDSHDHG HDDDAAATDN YDDYSSFFYQ PKFHAEDNHY QDEIDHGVGF SLLGSKTSAS AASWSFKGDH SKSHGKHSSS SSQVFQENPS SRLFDDVSTS
601: PPASYHEPDP HAKFDNYGPN SESDGDQPID KVSGDVHERG NLTSDRSHKF KVSDSAGHEV FPLDTEEHTD NSRTREESDS DSEPQLGLRL GALAGGFRNK
701: KTLPPYRMSS ASSKAEKEYI QIDDFGQSSR KDLYSKKASN TETRPSFMPP HPSSSDEDDS DMQHPGRTET KSDSLYSHSR VNHDDSEEEK LPTRSSSRIQ
801: ERSHKPSTGI RVQKRTNFKM PVSASSEDEE EVEREAARIN AKPNKTTGYG FSLRTKGQSK ANEKHSLPVT TKKTDKESHD QPSPRTVTSS HVPQTVKSPD
901: PDTPSRERER ASHVHPNLPE YDDIFARLGA LRAPSRR
Arabidopsis Description
Regulator of Vps4 activity in the MVB pathway protein [Source:UniProtKB/TrEMBL;Acc:F4ITF9]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.