Factsheet for TraesCS4D01G044400.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G044800.1	Wheat	mitochondrion	84.09	88.1
TraesCS4D01G044800.1	Wheat	mitochondrion	85.51	86.99
TraesCS4A01G269300.1	Wheat	mitochondrion	85.8	85.31
Zm00001d033714_P001	Maize	mitochondrion	58.52	58.69
EER93588	Sorghum	mitochondrion	56.53	58.19
Os03t0710000-01	Rice	plasma membrane	58.52	58.03
VIT_14s0006g03050.t01	Wine grape	mitochondrion	21.88	49.36
TraesCS4D01G219500.2	Wheat	mitochondrion	23.58	45.11
Solyc02g085830.2.1	Tomato	mitochondrion	20.74	35.1
PGSC0003DMT400032944	Potato	mitochondrion	20.45	34.62
GSMUA_Achr6P07700_001	Banana	cytosol, mitochondrion, nucleus	38.92	32.16
KRH45249	Soybean	mitochondrion	35.51	31.57
TraesCS4D01G219800.1	Wheat	mitochondrion	25.0	31.32
Solyc05g009550.2.1	Tomato	mitochondrion	37.5	30.91
GSMUA_Achr10P...	Banana	mitochondrion	41.76	30.37
KRH75395	Soybean	mitochondrion	34.66	30.27
PGSC0003DMT400033769	Potato	mitochondrion	36.36	29.98
CDY21093	Canola	mitochondrion	33.52	29.87
CDY50176	Canola	mitochondrion	33.24	29.7
GSMUA_Achr6P24100_001	Banana	mitochondrion	40.06	28.83
CDY19375	Canola	mitochondrion	32.67	28.19
VIT_01s0011g03330.t01	Wine grape	mitochondrion	37.22	27.99
AT1G13340.1	Thale cress	mitochondrion	32.39	27.87
TraesCS3D01G263400.1	Wheat	mitochondrion, plastid	23.58	26.02
Bra019826.1-P	Field mustard	mitochondrion	33.52	23.89
TraesCS4D01G219400.3	Wheat	mitochondrion, plastid	35.51	23.15
KRH46919	Soybean	mitochondrion	25.85	22.2
KRH01764	Soybean	mitochondrion	25.57	20.36
TraesCS5D01G353300.1	Wheat	mitochondrion	25.28	18.46
TraesCS3D01G451700.1	Wheat	cytosol	25.0	17.19
Bra016733.1-P	Field mustard	mitochondrion	33.81	15.93
TraesCS7D01G433700.1	Wheat	cytosol, mitochondrion, nucleus	15.91	7.71
TraesCS6D01G122600.1	Wheat	cytosol, nucleus, plastid	15.62	7.69
TraesCS3D01G253500.1	Wheat	nucleus	23.58	7.43

Protein Annotations

EnsemblPlants:TraesCS4D01G044400.1	EnsemblPlantsGene:TraesCS4D01G044400	Gene3D:1.20.1260.60	GO:GO:0006810	GO:GO:0008150	GO:GO:0015031
InterPro:Ist1	PANTHER:PTHR12161	PANTHER:PTHR12161:SF16	PFAM:PF03398	SEG:seg	MapMan:35.2

Description

No Description!

Coordinates

chr4D:+:20081816..20082874

Molecular Weight (calculated)

38312.2 Da

IEP (calculated)

7.449

GRAVY (calculated)

-0.534

Length

352 amino acids

Sequence
(BLAST)

001: MGRTLDVLLG RTTKQTARLK SLLHLATKRI AVVRAHREVR CAQARGDVEQ LLRQGHPDRA LLRAEQVIRE RGTLDALLLL DAYCALLADR SALLDDAHRD
101: CPEELREAAA GLCYAAARCG DLPELQEARA LLAARFGRGF ASGAAELRAG CGVNAKLVQR LSTALPSLES RQMVLLEIGA DKDIPVRLHS DAADSYEDPA
201: GRSHHGHGHR KKRHDDDDER RHATPRADDD NADSPRTFKD VEEAAQAAFE SAATAAAAAK AAIELSRAGP GSPDDRYRRN PGRAHADDET LHGGDHLAHG
301: KAFERIGHVR NYSSDAEDLP EKSRIRPGAS PVEACMLVRL KQIYMHGVAC ST

Best Arabidopsis Sequence Match ( AT1G13340.1 )
(BLAST)

001: MGKKLDALLG RSFKTNKFKS LITLALTRLS ILKNQRQARL SQAISDVTEL LKLGQHEHAY HRVDQVVKDQ NTLDVLFFIH GYFTLCLDRI HLFEHNRDCP
101: EELLEAVSGL LFAASRIGEF PELQEIRNVL ISRFGKDLAA RSIELRSNCG VDPKIIQKLS TRPPPKEVRM KALKEIAAEN NIVLKLDQAS TSTEGTTNMQ
201: GTSDVSKTKL TSKDGRGEGY GLSDSVKRGK KKYKDVADAA QAAFESAAHA AEAAQAAVEL SQFSPRGHDS PGNIGGENSF HGSENKESEQ EQEGNDDSSE
301: GEGDVMSESK RSMSDSEDII DVPVMSFRED PVKLLEKDTI IYDSEEETQP SVETITISKS KDEQNRMVGS NRADTRHVDH MVRSIEDPIM RKAGLKGPVS
401: VRTRQVRGY

Arabidopsis Description

Regulator of Vps4 activity in the MVB pathway protein [Source:UniProtKB/TrEMBL;Acc:Q9FX63]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.