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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 2
  • mitochondrion 6
  • nucleus 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:mitochondrion, nucleus, plastid
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:mitochondrion
Plant-mPloc:mitochondrion, nucleus
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:nucleus
plasma membrane: 27800704
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d033714_P001 Maize mitochondrion 67.32 68.09
EER93588 Sorghum mitochondrion 64.79 67.25
TraesCS4D01G044800.1 Wheat mitochondrion 60.28 61.85
TraesCS4A01G269300.1 Wheat mitochondrion 59.44 59.6
TraesCS4B01G044800.1 Wheat mitochondrion 56.34 59.52
TraesCS4B01G045100.1 Wheat mitochondrion 58.31 58.64
TraesCS4D01G044400.1 Wheat mitochondrion 58.03 58.52
VIT_14s0006g03050.t01 Wine grape mitochondrion 23.1 52.56
Os03t0257500-01 Rice mitochondrion 23.38 43.01
Solyc02g085830.2.1 Tomato mitochondrion 22.82 38.94
GSMUA_Achr6P07700_001 Banana cytosol, mitochondrion, nucleus 46.2 38.5
PGSC0003DMT400032944 Potato mitochondrion 22.25 37.98
KRH45249 Soybean mitochondrion 39.72 35.61
GSMUA_Achr10P... Banana mitochondrion 47.61 34.92
KRH75395 Soybean mitochondrion 39.15 34.49
Solyc05g009550.2.1 Tomato mitochondrion 41.41 34.43
GSMUA_Achr6P24100_001 Banana mitochondrion 47.32 34.36
PGSC0003DMT400033769 Potato mitochondrion 40.28 33.49
CDY50176 Canola mitochondrion 35.49 31.98
CDY21093 Canola mitochondrion 35.49 31.9
CDY19375 Canola mitochondrion 34.65 30.15
AT1G13340.1 Thale cress mitochondrion 34.65 30.07
VIT_01s0011g03330.t01 Wine grape mitochondrion 38.31 29.06
Os01t0687700-01 Rice mitochondrion, plasma membrane 23.94 26.65
Bra019826.1-P Field mustard mitochondrion 35.21 25.3
Os03t0257600-01 Rice mitochondrion 36.06 23.7
KRH46919 Soybean mitochondrion 26.2 22.68
KRH01764 Soybean mitochondrion 27.89 22.4
Os09t0547200-01 Rice mitochondrion 26.48 19.75
Bra016733.1-P Field mustard mitochondrion 35.21 16.73
Os08t0175200-01 Rice nucleus 25.63 16.22
Os02t0159200-01 Rice nucleus 16.34 8.59
Os06t0687000-00 Rice mitochondrion 16.62 8.09
Os01t0706400-01 Rice plasma membrane 23.94 7.72
Protein Annotations
Gene3D:1.20.1260.60MapMan:35.2EntrezGene:4333874ProteinID:AAX95664.1ProteinID:ABF98497.1EMBL:AK060065
EMBL:AK099364EMBL:AK104418ProteinID:BAF12960.1ProteinID:BAS86009.1ProteinID:EAZ28328.1GO:GO:0006810
GO:GO:0008150GO:GO:0015031InterPro:Ist1EnsemblPlantsGene:Os03g0710000EnsemblPlants:Os03t0710000-01PFAM:PF03398
PANTHER:PTHR12161PANTHER:PTHR12161:SF16UniProt:Q53RJ8UniParc:UPI00000AAAF0RefSeq:XP_015632740.1SEG:seg
Description
Protein of unknown function DUF292, eukaryotic domain containing protein. (Os03t0710000-01);Protein of unknown function DUF292, eukaryotic domain containing protein. (Os03t0710000-02)
Coordinates
chr3:+:28631644..28633235
Molecular Weight (calculated)
38904.0 Da
IEP (calculated)
8.158
GRAVY (calculated)
-0.574
Length
355 amino acids
Sequence
(BLAST)
001: MGRTLDVLLG RTTKQTARLK SMLGLAVTRL GVLRGHRQVR CAQARGDVEQ LLRLGHPDRA LLRAEQVIRE QNTLDAFLML ESYCNLITER AALVDSHREC
101: PEELREAAAG LIYAAARCGD VPELQEVKRL MAAKFGREFV SSAAELRSGC GINAKIVQKL STKQPSLESR QMVLQEIAAE KGIAGVVVHV VHEPSSHDED
201: SGLSHRRRRC DGERRHRVHQ PQVDLEEDGS SRYRNVEAAA QAAFESAATA AAAAKAAMEL SRGESGGRDD DRRRPGGAQF DRADEETLAG GEVSGDGKKS
301: GRIRRASLGR NYSSEIEDSA EDDEVVRHEI TAESEVKPRG LTRSVPVSVR TKRVS
Best Arabidopsis Sequence Match ( AT1G13340.1 )
(BLAST)
001: MGKKLDALLG RSFKTNKFKS LITLALTRLS ILKNQRQARL SQAISDVTEL LKLGQHEHAY HRVDQVVKDQ NTLDVLFFIH GYFTLCLDRI HLFEHNRDCP
101: EELLEAVSGL LFAASRIGEF PELQEIRNVL ISRFGKDLAA RSIELRSNCG VDPKIIQKLS TRPPPKEVRM KALKEIAAEN NIVLKLDQAS TSTEGTTNMQ
201: GTSDVSKTKL TSKDGRGEGY GLSDSVKRGK KKYKDVADAA QAAFESAAHA AEAAQAAVEL SQFSPRGHDS PGNIGGENSF HGSENKESEQ EQEGNDDSSE
301: GEGDVMSESK RSMSDSEDII DVPVMSFRED PVKLLEKDTI IYDSEEETQP SVETITISKS KDEQNRMVGS NRADTRHVDH MVRSIEDPIM RKAGLKGPVS
401: VRTRQVRGY
Arabidopsis Description
Regulator of Vps4 activity in the MVB pathway protein [Source:UniProtKB/TrEMBL;Acc:Q9FX63]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.