Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 6
- nucleus 2
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
plasma membrane:
27800704
|
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Zm00001d033714_P001 | Maize | mitochondrion | 67.32 | 68.09 |
EER93588 | Sorghum | mitochondrion | 64.79 | 67.25 |
TraesCS4D01G044800.1 | Wheat | mitochondrion | 60.28 | 61.85 |
TraesCS4A01G269300.1 | Wheat | mitochondrion | 59.44 | 59.6 |
TraesCS4B01G044800.1 | Wheat | mitochondrion | 56.34 | 59.52 |
TraesCS4B01G045100.1 | Wheat | mitochondrion | 58.31 | 58.64 |
TraesCS4D01G044400.1 | Wheat | mitochondrion | 58.03 | 58.52 |
VIT_14s0006g03050.t01 | Wine grape | mitochondrion | 23.1 | 52.56 |
Os03t0257500-01 | Rice | mitochondrion | 23.38 | 43.01 |
Solyc02g085830.2.1 | Tomato | mitochondrion | 22.82 | 38.94 |
GSMUA_Achr6P07700_001 | Banana | cytosol, mitochondrion, nucleus | 46.2 | 38.5 |
PGSC0003DMT400032944 | Potato | mitochondrion | 22.25 | 37.98 |
KRH45249 | Soybean | mitochondrion | 39.72 | 35.61 |
GSMUA_Achr10P... | Banana | mitochondrion | 47.61 | 34.92 |
KRH75395 | Soybean | mitochondrion | 39.15 | 34.49 |
Solyc05g009550.2.1 | Tomato | mitochondrion | 41.41 | 34.43 |
GSMUA_Achr6P24100_001 | Banana | mitochondrion | 47.32 | 34.36 |
PGSC0003DMT400033769 | Potato | mitochondrion | 40.28 | 33.49 |
CDY50176 | Canola | mitochondrion | 35.49 | 31.98 |
CDY21093 | Canola | mitochondrion | 35.49 | 31.9 |
CDY19375 | Canola | mitochondrion | 34.65 | 30.15 |
AT1G13340.1 | Thale cress | mitochondrion | 34.65 | 30.07 |
VIT_01s0011g03330.t01 | Wine grape | mitochondrion | 38.31 | 29.06 |
Os01t0687700-01 | Rice | mitochondrion, plasma membrane | 23.94 | 26.65 |
Bra019826.1-P | Field mustard | mitochondrion | 35.21 | 25.3 |
Os03t0257600-01 | Rice | mitochondrion | 36.06 | 23.7 |
KRH46919 | Soybean | mitochondrion | 26.2 | 22.68 |
KRH01764 | Soybean | mitochondrion | 27.89 | 22.4 |
Os09t0547200-01 | Rice | mitochondrion | 26.48 | 19.75 |
Bra016733.1-P | Field mustard | mitochondrion | 35.21 | 16.73 |
Os08t0175200-01 | Rice | nucleus | 25.63 | 16.22 |
Os02t0159200-01 | Rice | nucleus | 16.34 | 8.59 |
Os06t0687000-00 | Rice | mitochondrion | 16.62 | 8.09 |
Os01t0706400-01 | Rice | plasma membrane | 23.94 | 7.72 |
Protein Annotations
Gene3D:1.20.1260.60 | MapMan:35.2 | EntrezGene:4333874 | ProteinID:AAX95664.1 | ProteinID:ABF98497.1 | EMBL:AK060065 |
EMBL:AK099364 | EMBL:AK104418 | ProteinID:BAF12960.1 | ProteinID:BAS86009.1 | ProteinID:EAZ28328.1 | GO:GO:0006810 |
GO:GO:0008150 | GO:GO:0015031 | InterPro:Ist1 | EnsemblPlantsGene:Os03g0710000 | EnsemblPlants:Os03t0710000-01 | PFAM:PF03398 |
PANTHER:PTHR12161 | PANTHER:PTHR12161:SF16 | UniProt:Q53RJ8 | UniParc:UPI00000AAAF0 | RefSeq:XP_015632740.1 | SEG:seg |
Description
Protein of unknown function DUF292, eukaryotic domain containing protein. (Os03t0710000-01);Protein of unknown function DUF292, eukaryotic domain containing protein. (Os03t0710000-02)
Coordinates
chr3:+:28631644..28633235
Molecular Weight (calculated)
38904.0 Da
IEP (calculated)
8.158
GRAVY (calculated)
-0.574
Length
355 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRTLDVLLG RTTKQTARLK SMLGLAVTRL GVLRGHRQVR CAQARGDVEQ LLRLGHPDRA LLRAEQVIRE QNTLDAFLML ESYCNLITER AALVDSHREC
101: PEELREAAAG LIYAAARCGD VPELQEVKRL MAAKFGREFV SSAAELRSGC GINAKIVQKL STKQPSLESR QMVLQEIAAE KGIAGVVVHV VHEPSSHDED
201: SGLSHRRRRC DGERRHRVHQ PQVDLEEDGS SRYRNVEAAA QAAFESAATA AAAAKAAMEL SRGESGGRDD DRRRPGGAQF DRADEETLAG GEVSGDGKKS
301: GRIRRASLGR NYSSEIEDSA EDDEVVRHEI TAESEVKPRG LTRSVPVSVR TKRVS
101: PEELREAAAG LIYAAARCGD VPELQEVKRL MAAKFGREFV SSAAELRSGC GINAKIVQKL STKQPSLESR QMVLQEIAAE KGIAGVVVHV VHEPSSHDED
201: SGLSHRRRRC DGERRHRVHQ PQVDLEEDGS SRYRNVEAAA QAAFESAATA AAAAKAAMEL SRGESGGRDD DRRRPGGAQF DRADEETLAG GEVSGDGKKS
301: GRIRRASLGR NYSSEIEDSA EDDEVVRHEI TAESEVKPRG LTRSVPVSVR TKRVS
001: MGKKLDALLG RSFKTNKFKS LITLALTRLS ILKNQRQARL SQAISDVTEL LKLGQHEHAY HRVDQVVKDQ NTLDVLFFIH GYFTLCLDRI HLFEHNRDCP
101: EELLEAVSGL LFAASRIGEF PELQEIRNVL ISRFGKDLAA RSIELRSNCG VDPKIIQKLS TRPPPKEVRM KALKEIAAEN NIVLKLDQAS TSTEGTTNMQ
201: GTSDVSKTKL TSKDGRGEGY GLSDSVKRGK KKYKDVADAA QAAFESAAHA AEAAQAAVEL SQFSPRGHDS PGNIGGENSF HGSENKESEQ EQEGNDDSSE
301: GEGDVMSESK RSMSDSEDII DVPVMSFRED PVKLLEKDTI IYDSEEETQP SVETITISKS KDEQNRMVGS NRADTRHVDH MVRSIEDPIM RKAGLKGPVS
401: VRTRQVRGY
101: EELLEAVSGL LFAASRIGEF PELQEIRNVL ISRFGKDLAA RSIELRSNCG VDPKIIQKLS TRPPPKEVRM KALKEIAAEN NIVLKLDQAS TSTEGTTNMQ
201: GTSDVSKTKL TSKDGRGEGY GLSDSVKRGK KKYKDVADAA QAAFESAAHA AEAAQAAVEL SQFSPRGHDS PGNIGGENSF HGSENKESEQ EQEGNDDSSE
301: GEGDVMSESK RSMSDSEDII DVPVMSFRED PVKLLEKDTI IYDSEEETQP SVETITISKS KDEQNRMVGS NRADTRHVDH MVRSIEDPIM RKAGLKGPVS
401: VRTRQVRGY
Arabidopsis Description
Regulator of Vps4 activity in the MVB pathway protein [Source:UniProtKB/TrEMBL;Acc:Q9FX63]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.