CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
cytosol 2
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH55350	Soybean	extracellular	82.78	84.8
Bra021112.1-P	Field mustard	nucleus	29.19	25.52
CDY20110	Canola	nucleus	29.19	25.52
CDY21843	Canola	nucleus	29.67	25.31
KRH06586	Soybean	cytosol	7.18	24.59
Bra027239.1-P	Field mustard	plastid	28.23	23.32
AT3G15490.1	Thale cress	mitochondrion, nucleus	23.45	23.22
KRG89505	Soybean	mitochondrion	20.57	22.75
CDX98558	Canola	plastid	27.75	22.48
CDX97673	Canola	plastid	27.75	22.48
CDX93076	Canola	mitochondrion	25.84	22.31
Bra013184.1-P	Field mustard	mitochondrion	25.84	22.31
CDY15051	Canola	cytosol	16.75	19.77
KRG90825	Soybean	mitochondrion	22.49	14.51
KRH35947	Soybean	mitochondrion	22.49	14.51
KRH44367	Soybean	mitochondrion	21.05	13.66
KRH45249	Soybean	mitochondrion	25.84	13.64
KRH35011	Soybean	mitochondrion	25.36	13.62
KRH70127	Soybean	mitochondrion, nucleus	24.4	13.42
KRH07948	Soybean	mitochondrion	26.32	12.47
KRH69704	Soybean	mitochondrion	25.84	12.33
KRH47048	Soybean	mitochondrion	22.01	12.04
KRH75395	Soybean	mitochondrion	22.97	11.91
KRH26928	Soybean	nucleus	36.36	11.46
KRH22410	Soybean	mitochondrion, nucleus	35.89	11.26
KRH46919	Soybean	mitochondrion	22.01	11.22
KRH01764	Soybean	mitochondrion	23.45	11.09
KRH23458	Soybean	mitochondrion	21.05	11.03
KRH08570	Soybean	nucleus	25.36	10.04
KRH70215	Soybean	nucleus	25.36	9.87
KRH60150	Soybean	cytosol, mitochondrion, nucleus, plastid	25.36	9.12
KRH41442	Soybean	cytosol	14.83	6.95
KRH48400	Soybean	mitochondrion, nucleus	23.45	6.67
KRH39280	Soybean	mitochondrion, nucleus	23.45	6.67
KRH60286	Soybean	nucleus	22.49	6.14
KRH41578	Soybean	nucleus	22.97	6.02
KRH74171	Soybean	mitochondrion	24.4	4.79
KRH49036	Soybean	mitochondrion	23.92	4.75

Protein Annotations

EMBL:ACUP02007449	EnsemblPlants:KRH26063	EnsemblPlantsGene:GLYMA_12G149600	Gene3D:1.20.1260.60	GO:GO:0006810	GO:GO:0008150
GO:GO:0015031	InterPro:Ist1	PANTHER:PTHR12161	PANTHER:PTHR12161:SF20	PFAM:PF03398	ProteinID:KRH26063
ProteinID:KRH26063.1	UniParc:UPI00023D1118	UniProt:I1LT16	MapMan:35.2	:	:

Description

hypothetical protein

Coordinates

chr12:-:21351967..21353786

Molecular Weight (calculated)

24131.4 Da

IEP (calculated)

7.977

GRAVY (calculated)

-0.070

Length

209 amino acids

Sequence
(BLAST)

001: MMQIEKKKPS RPMWSYAIRD ALACVGVSGW KKAFKCENLI MQFQAQLNIQ KNRRRVIIVQ SRADIAQLLE IDKLESAFSR VDQLCKDTCL LTAYDLIDNF
101: CECLITNMSF ISKCSSVHNL PINVVVAIAS LTYASSRCGE LSLLHLIRNL FRERYGREFD ITNVELFAGN YVDLPLRKNL SNYSVLEDEK LMLLNEIAHE
201: NFNQQLERL

Best Arabidopsis Sequence Match ( AT3G15490.1 )
(BLAST)

001: MVRQSRSDIA QLLSYGRYSE ALPKAKQFYE DERRLSAYDQ VELFCTTILQ NISSLKYENN VDLLPEETKK AMAGIIFAAS RIGELEDLQH IRSFFVQRFG
101: LKFDKECVDL RQGNVVGFEI VKILNTNMRG DEITHIVREL SHKYKTNITT STDSISEDLA SSDDLGIADS DAMKVEKMKR ALRRKKVMKE NSKFLHPNLR
201: ESQGRDRSFR R

Arabidopsis Description

Regulator of Vps4 activity in the MVB pathway protein [Source:UniProtKB/TrEMBL;Acc:Q4PSP2]
SUBAcon: [mitochondrion,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.