Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX68838 | Canola | nucleus | 95.88 | 96.03 |
| KRH06586 | Soybean | cytosol | 6.5 | 67.21 |
| AT4G32350.1 | Thale cress | nucleus | 72.74 | 62.7 |
| CDX87282 | Canola | cytosol | 12.84 | 40.1 |
| GSMUA_Achr5P23530_001 | Banana | nucleus | 10.78 | 37.99 |
| CDY52976 | Canola | mitochondrion | 16.32 | 33.33 |
| VIT_11s0016g04010.t01 | Wine grape | nucleus | 37.24 | 32.37 |
| KRH48400 | Soybean | mitochondrion, nucleus | 37.24 | 31.97 |
| KRH39280 | Soybean | mitochondrion, nucleus | 36.93 | 31.7 |
| CDX87899 | Canola | nucleus | 13.79 | 31.52 |
| CDY49898 | Canola | mitochondrion | 13.47 | 31.02 |
| CDY37561 | Canola | nucleus | 17.91 | 29.97 |
| CDY41108 | Canola | nucleus | 17.75 | 29.63 |
| CDY49897 | Canola | nucleus | 12.36 | 29.1 |
| KRH60286 | Soybean | nucleus | 35.18 | 28.98 |
| CDX87900 | Canola | mitochondrion | 13.15 | 28.82 |
| GSMUA_Achr6P29590_001 | Banana | cytosol | 20.6 | 28.38 |
| KRH41578 | Soybean | nucleus | 34.71 | 27.44 |
| Solyc07g022860.2.1 | Tomato | nucleus | 22.82 | 26.13 |
| PGSC0003DMT400022180 | Potato | nucleus | 22.82 | 26.09 |
| CDX78503 | Canola | mitochondrion | 13.0 | 23.3 |
| TraesCS6A01G133000.1 | Wheat | cytosol, nucleus, plastid | 26.15 | 23.08 |
| TraesCS6D01G122600.1 | Wheat | cytosol, nucleus, plastid | 26.15 | 23.08 |
| EES04550 | Sorghum | nucleus | 24.88 | 22.99 |
| CDY22873 | Canola | mitochondrion | 12.84 | 22.63 |
| TraesCS6B01G161300.1 | Wheat | cytosol, nucleus, plastid | 25.52 | 22.58 |
| Zm00001d053852_P001 | Maize | nucleus | 24.41 | 22.48 |
| HORVU6Hr1G025460.3 | Barley | nucleus | 25.67 | 22.01 |
| CDX70491 | Canola | mitochondrion | 13.15 | 21.9 |
| Os06t0687000-00 | Rice | mitochondrion | 24.88 | 21.54 |
| CDY33850 | Canola | mitochondrion | 12.36 | 21.49 |
| Os02t0159200-01 | Rice | nucleus | 22.98 | 21.48 |
| CDY04642 | Canola | cytosol | 5.07 | 21.33 |
| TraesCS7A01G445700.1 | Wheat | cytosol, mitochondrion, nucleus | 23.45 | 20.87 |
| TraesCS7D01G433700.1 | Wheat | cytosol, mitochondrion, nucleus | 23.77 | 20.66 |
| TraesCS7B01G345200.1 | Wheat | cytosol, nucleus, plastid | 23.77 | 20.63 |
| CDY69937 | Canola | plastid | 13.47 | 20.48 |
| HORVU7Hr1G101130.3 | Barley | cytosol, nucleus | 23.45 | 20.39 |
| CDY41639 | Canola | plastid | 13.79 | 20.23 |
| GSMUA_Achr9P11280_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 20.29 | 19.02 |
| CDX98558 | Canola | plastid | 7.77 | 18.99 |
| CDX97673 | Canola | plastid | 7.77 | 18.99 |
| KXG20673 | Sorghum | cytosol, nucleus, plastid | 23.61 | 18.98 |
| CDX75521 | Canola | plastid | 12.84 | 18.71 |
| GSMUA_Achr8P15690_001 | Banana | mitochondrion | 19.81 | 18.66 |
| CDX69159 | Canola | plastid | 13.0 | 18.64 |
| Zm00001d014521_P001 | Maize | mitochondrion | 22.5 | 18.42 |
| CDY20110 | Canola | nucleus | 6.81 | 17.99 |
| CDY21843 | Canola | nucleus | 6.81 | 17.55 |
| CDX93076 | Canola | mitochondrion | 6.66 | 17.36 |
| CDY58595 | Canola | mitochondrion | 8.87 | 17.34 |
| CDY53122 | Canola | mitochondrion | 8.87 | 17.34 |
| CDY15051 | Canola | cytosol | 4.44 | 15.82 |
| CDY50176 | Canola | mitochondrion | 8.72 | 13.96 |
| CDY21093 | Canola | mitochondrion | 8.72 | 13.92 |
| CDY19375 | Canola | mitochondrion | 8.87 | 13.73 |
| CDY46461 | Canola | cytosol, mitochondrion, nucleus | 12.2 | 13.6 |
| CDX91784 | Canola | nucleus | 12.36 | 13.45 |
| CDY48635 | Canola | cytosol | 5.86 | 11.04 |
| Zm00001d036913_P001 | Maize | cytosol | 8.24 | 8.51 |
| CDY35879 | Canola | mitochondrion | 12.2 | 8.4 |
| CDX82713 | Canola | mitochondrion | 12.2 | 8.38 |
| CDY43502 | Canola | mitochondrion | 12.2 | 8.24 |
| Zm00001d051744_P001 | Maize | nucleus | 5.71 | 7.17 |
Protein Annotations
| EnsemblPlants:CDX75238 | EnsemblPlantsGene:GSBRNA2T00121096001 | Gene3D:1.20.1260.60 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015031 |
| InterPro:Ist1 | PANTHER:PTHR12161 | PANTHER:PTHR12161:SF29 | PFAM:PF03398 | ProteinID:CDX75238 | ProteinID:CDX75238.1 |
| SEG:seg | UniParc:UPI0004EF3ED9 | MapMan:35.2 | : | : | : |
Description
BnaA01g04640D
Coordinates
chrLK031804:+:250342..253211
Molecular Weight (calculated)
72224.7 Da
IEP (calculated)
9.702
GRAVY (calculated)
-1.129
Length
631 amino acids
Sequence
(BLAST)
(BLAST)
001: MFDGIFGRGF APKGKPLIKL TKNRIDVLRR KRTATIKFLK GDFADLISNS RDVNAYTRAG GLLDELRHLW NLDFVESTCD FVYKQLSTMQ KMEECPEDCR
101: EAVSSLMFAA AGFSELPELR ELRQMFHEKY GDSLSVFVNQ ELVENMTSKP FSLEKKVKLM EDVASEYAIR WDSKAFEKRI LRQNGSSVKD TTHEKHKSLD
201: GSVALPSERK KDVASERRDP FFRPDNYQNG LREHQRGLAS KNKSDDVRHA SRSESKDDKA ERNEFHLQPN HKSSRGRPQP IFNEGDTIVM KIKRENLVEG
301: IGHQNGEAVA APKKTEVTEK HKRSSTKTED KLVLGFKQES FFKGYKHENG EEHAPQKVED NLSMPPKPRS KRTPSIDSVR RHRSDHERRE NTVPVREGTE
401: KDSSAGNIKV GGDGYDPARK FEEREAERMM KSLPPPPYVK PSGKAKIEKP EASAYPKARF DGEEGNCPDI DKKVSEAGQH QVNDVDDQSL KRRSSRRKHI
501: IQSNDGDDDT RSSRRREHSR KGLQVLVDED EKDSEEKMMD KLLMHYSKKP SSYEESKSRR SHRRKAEGEE IHHPARSLSL PSEQFAGPSE PAKTFARAAS
601: FQPERSEAKH VHPKLPDYED LAARFAELKG R
101: EAVSSLMFAA AGFSELPELR ELRQMFHEKY GDSLSVFVNQ ELVENMTSKP FSLEKKVKLM EDVASEYAIR WDSKAFEKRI LRQNGSSVKD TTHEKHKSLD
201: GSVALPSERK KDVASERRDP FFRPDNYQNG LREHQRGLAS KNKSDDVRHA SRSESKDDKA ERNEFHLQPN HKSSRGRPQP IFNEGDTIVM KIKRENLVEG
301: IGHQNGEAVA APKKTEVTEK HKRSSTKTED KLVLGFKQES FFKGYKHENG EEHAPQKVED NLSMPPKPRS KRTPSIDSVR RHRSDHERRE NTVPVREGTE
401: KDSSAGNIKV GGDGYDPARK FEEREAERMM KSLPPPPYVK PSGKAKIEKP EASAYPKARF DGEEGNCPDI DKKVSEAGQH QVNDVDDQSL KRRSSRRKHI
501: IQSNDGDDDT RSSRRREHSR KGLQVLVDED EKDSEEKMMD KLLMHYSKKP SSYEESKSRR SHRRKAEGEE IHHPARSLSL PSEQFAGPSE PAKTFARAAS
601: FQPERSEAKH VHPKLPDYED LAARFAELKG R
001: MFDGFLGRGF APKGKPLIKL TKNRIDVLRR KRNATIKFLK RDLADLIING HDYNAFSRAG GLLDELRYLW SLDFVEQTCD FVYKQLSTMQ KTPECPEDCR
101: EAISSLMFAA SGFSELPELR ELRQMFHEKY TDSLALFVNQ ELVENMSSKP FSMEKKVKLM EDVALEFSIR WDSKDFEKRI VRQNSISVME TPKSTNDKYK
201: PVDRNMALPK REEFEGSENG VSLNRKTAEA SERRDPLFQS DKESYQNGLR GNQRGLTYKE RSENVLHASR SESKDNKAER KEFYLHSKQN PAREKHQPIF
301: NEGDTIVMKV NYGNLGQGNG HRPGVVDAHK KTEFVASERK EFYSQSKQEP SRERHQPIFN DGDTIVMKVK HENHVQGNGH KNGVVDLHKK IEVNASEKLK
401: SSSSKRADKL VIGFKQESFF QGYKHEKNEE HAHQKVEDST SRPPKPNSKS KRAESINPGS RHHNDRESKE NAVLVGKSTE EDPSGDNVKG GEYEYDHANP
501: ARKVEERETE RMKSPFYKSL PPPYVKKSIA KARHEKAEAL DNPKARFDGE EGNHPDNGKN VYGAERRNGA GHHEVNDIDN ASLKRQTNRR KHIVESGGDD
601: HISSRRRENS RKGLQVLIDE DEKDSEEKMM DKLLMHYSKK PSSYEKDNVQ EESKSRRTHL KKGESDEEMM IHQPARSRSL PAEQLAGPSE PAKTFARAAS
701: FQPERSSEAK HVHPKLPNYD DLAARFAELK GR
101: EAISSLMFAA SGFSELPELR ELRQMFHEKY TDSLALFVNQ ELVENMSSKP FSMEKKVKLM EDVALEFSIR WDSKDFEKRI VRQNSISVME TPKSTNDKYK
201: PVDRNMALPK REEFEGSENG VSLNRKTAEA SERRDPLFQS DKESYQNGLR GNQRGLTYKE RSENVLHASR SESKDNKAER KEFYLHSKQN PAREKHQPIF
301: NEGDTIVMKV NYGNLGQGNG HRPGVVDAHK KTEFVASERK EFYSQSKQEP SRERHQPIFN DGDTIVMKVK HENHVQGNGH KNGVVDLHKK IEVNASEKLK
401: SSSSKRADKL VIGFKQESFF QGYKHEKNEE HAHQKVEDST SRPPKPNSKS KRAESINPGS RHHNDRESKE NAVLVGKSTE EDPSGDNVKG GEYEYDHANP
501: ARKVEERETE RMKSPFYKSL PPPYVKKSIA KARHEKAEAL DNPKARFDGE EGNHPDNGKN VYGAERRNGA GHHEVNDIDN ASLKRQTNRR KHIVESGGDD
601: HISSRRRENS RKGLQVLIDE DEKDSEEKMM DKLLMHYSKK PSSYEKDNVQ EESKSRRTHL KKGESDEEMM IHQPARSRSL PAEQLAGPSE PAKTFARAAS
701: FQPERSSEAK HVHPKLPNYD DLAARFAELK GR
Arabidopsis Description
Regulator of Vps4 activity in the MVB pathway protein [Source:UniProtKB/TrEMBL;Acc:Q8RXT2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.