Factsheet for GSMUA_Achr8P15690_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 3
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr7P10650_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G79910.1	GSMUA_Achr10P...	AT2G39760.1	21798944
AT1G79910.1	GSMUA_Achr7P10650_001	AT2G39760.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P23530_001	Banana	nucleus	17.46	65.36
GSMUA_Achr9P11280_001	Banana	cytosol, mitochondrion, nucleus, plastid	58.96	58.69
GSMUA_Achr6P29590_001	Banana	cytosol	38.06	55.68
KRG89505	Soybean	mitochondrion	10.75	38.1
CDX87282	Canola	cytosol	11.04	36.63
Os02t0159200-01	Rice	nucleus	34.78	34.52
KRH06586	Soybean	cytosol	3.13	34.43
TraesCS6B01G161300.1	Wheat	cytosol, nucleus, plastid	35.97	33.8
TraesCS6D01G122600.1	Wheat	cytosol, nucleus, plastid	35.37	33.15
TraesCS6A01G133000.1	Wheat	cytosol, nucleus, plastid	35.22	33.01
Zm00001d053852_P001	Maize	nucleus	33.28	32.55
EES04550	Sorghum	nucleus	33.13	32.5
Bra035204.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	8.36	32.37
CDX87899	Canola	nucleus	13.13	31.88
HORVU6Hr1G025460.3	Barley	nucleus	34.93	31.79
PGSC0003DMT400042551	Potato	nucleus	14.48	31.39
Os06t0687000-00	Rice	mitochondrion	33.88	31.14
Solyc06g066690.2.1	Tomato	nucleus	14.33	31.07
CDY52976	Canola	mitochondrion	14.33	31.07
KRH23458	Soybean	mitochondrion	17.61	29.57
CDY49898	Canola	mitochondrion	12.09	29.56
CDY49897	Canola	nucleus	11.49	28.73
CDX87900	Canola	mitochondrion	12.24	28.47
VIT_09s0002g04580.t01	Wine grape	nucleus	21.04	28.14
AT1G52315.1	Thale cress	mitochondrion	14.48	27.95
Solyc12g043150.1.1	Tomato	nucleus	21.19	27.84
Bra018962.1-P	Field mustard	extracellular, vacuole	14.78	27.81
TraesCS7A01G445700.1	Wheat	cytosol, mitochondrion, nucleus	29.25	27.64
HORVU7Hr1G101130.3	Barley	cytosol, nucleus	29.85	27.55
TraesCS7D01G433700.1	Wheat	cytosol, mitochondrion, nucleus	29.7	27.41
KXG20673	Sorghum	cytosol, nucleus, plastid	32.09	27.39
TraesCS7B01G345200.1	Wheat	cytosol, nucleus, plastid	29.4	27.1
KRH44367	Soybean	mitochondrion	12.99	27.02
KRH47048	Soybean	mitochondrion	15.37	26.96
CDY41108	Canola	nucleus	15.07	26.72
CDY37561	Canola	nucleus	14.93	26.53
PGSC0003DMT400014529	Potato	nucleus	17.76	26.44
Bra008502.1-P	Field mustard	nucleus	14.93	26.39
Solyc03g120120.2.1	Tomato	nucleus	18.66	26.26
AT1G79910.1	Thale cress	nucleus	14.78	25.98
Zm00001d014521_P001	Maize	mitochondrion	29.55	25.68
PGSC0003DMT400092826	Potato	nucleus	15.22	24.0
VIT_11s0016g04010.t01	Wine grape	nucleus	22.24	20.52
CDX68838	Canola	nucleus	18.96	20.16
KRH48400	Soybean	mitochondrion, nucleus	22.09	20.14
KRH39280	Soybean	mitochondrion, nucleus	22.09	20.14
GSMUA_Achr3P29510_001	Banana	mitochondrion	9.7	19.94
CDX75238	Canola	nucleus	18.66	19.81
GSMUA_Achr9P21370_001	Banana	mitochondrion	9.55	19.57
AT4G32350.1	Thale cress	nucleus	19.7	18.03
PGSC0003DMT400022180	Potato	nucleus	14.78	17.93
GSMUA_Achr3P26880_001	Banana	mitochondrion	11.49	17.82
Solyc07g022860.2.1	Tomato	nucleus	14.48	17.6
KRH60286	Soybean	nucleus	20.0	17.49
KRH41578	Soybean	nucleus	20.0	16.79
GSMUA_Achr5P23420_001	Banana	mitochondrion	11.79	16.12
Bra030391.1-P	Field mustard	nucleus	11.79	15.8
GSMUA_Achr6P07700_001	Banana	cytosol, mitochondrion, nucleus	9.1	14.32
GSMUA_Achr6P02830_001	Banana	cytosol	12.54	14.29
GSMUA_Achr6P24100_001	Banana	mitochondrion	9.55	13.09
Zm00001d036913_P001	Maize	cytosol	11.79	12.93
GSMUA_Achr10P...	Banana	mitochondrion	9.25	12.81
Zm00001d051744_P001	Maize	nucleus	8.51	11.35
GSMUA_Achr1P14380_001	Banana	nucleus	15.07	8.11

Protein Annotations

EnsemblPlants:GSMUA_Achr8P15690_001	EnsemblPlants:GSMUA_Achr8T15690_001	EnsemblPlantsGene:GSMUA_Achr8G15690_001	Gene3D:1.20.1260.60	GO:GO:0006810	GO:GO:0008150
GO:GO:0015031	InterPro:Ist1	PANTHER:PTHR12161	PANTHER:PTHR12161:SF40	PFAM:PF03398	SEG:seg
UniParc:UPI000294B766	UniProt:M0TQS2	MapMan:35.2	:	:	:

Description

Putative uncharacterized protein Sb04g004110 [Source:GMGC_GENE;Acc:GSMUA_Achr8G15690_001]

Coordinates

chr8:-:13310764..13315031

Molecular Weight (calculated)

75567.5 Da

IEP (calculated)

9.905

GRAVY (calculated)

-0.885

Length

670 amino acids

Sequence
(BLAST)

001: MLCSLLGGKF SNKCKHAVRF IKARMGPIRN KKQAVVRCLK RDVAGLIAAG HEAIAFGRID ALIVEMNHAS CYDMIEQFCQ YILSQLPSLR KQRECPQEAM
101: EAISTLIFAA ARFPDLPELC DLRHAFVERY GSHMESSVKA EFVEKIQEKS FSKKKKLQLL QNIAEEFTLR WDPKTSCLQS HNAPKPKSTR PKEVAASHDV
201: DNGASSSAKA PTKEESPSKR KYGSNPVSAV GKQGGEVEQK DIHVIPTTIN RQSHDQVEKP TSTENTELYQ TDNAVRPFVK HKRNHDGIRK NDEIKVDYLQ
301: SRTEKVQKEQ HHSIEKHEVG SVKSQNVRLA NVAPPYAKSI DSRFHVEETR GDGTVPPCTK LNWIENGHHV EGKIGDVRKH NRSQRHEASD RSVVEKPSVG
401: PVNNNGRGRY VIPPYVKPGV IDFSTNGEQT LQNIGVDDGK SNGTQGVSRD EKPKPVCMRR KSQRPPVTEI KEGTIDDEKT VSFTPGDQRR HRDKRSAGTN
501: DENFVEEKIA IRESRSRIGD EMDNAIDYSK LLLRSSNELR RHTSRHTAAM NDCQYDEEEM AVEKLLLHYS RKGRARDPIK ERRTANHVDL DRFERPENSK
601: IQLIQRRAVP PPERAISVPS EPVSPAEVKA PARSTSMQPD PSNPKVGRVH PKLPEFDQLA ARLAATKKKT

Best Arabidopsis Sequence Match ( AT4G32350.3 )
(BLAST)

001: MFDGFLGRGF APKGKPLIKL TKNRIDVLRR KRNATIKFLK RDLADLIING HDYNAFSRAG GLLDELRYLW SLDFVEQTCD FVYKQLSTMQ KTPECPEDCR
101: EAISSLMFAA SGFSELPELR ELRQMFHEKY TDSLALFVNQ ELVENMSSKP FSMEKKVKLM EDVALEFSIR WDSKDFEKRI VRQNSISVME TPKSTNDKYK
201: PVDRNMALPK REEFEGSENG VSLNRKTAEA SERRDPLFQS DKESYQNGLR GNQRGLTYKE RSENVLHASR SESKDNKAER KEFYLHSKQN PAREKHQPIF
301: NEGDTIVMKV NYGNLGQGNG HRPGVVDAHK KTEFVASERK EFYSQSKQEP SRERHQPIFN DGDTIVMKVK HENHVQGNGH KNGVVDLHKK IEVNASEKLK
401: SSSSKRADKL VIGFKQESFF QGYKHEKNEE HAHQKVEDST SRPPKPNSKS KRAESINPGS RHHNDRESKE NAVLVGKSTE EDPSGDNVKG GEYEYDHANP
501: ARKVEERETE RMKSPFYKSL PPPYVKKSIA KARHEKAEAL DNPKARFDGE EGNHPDNGKN VYGAERRNGA GHHEVNDIDN ASLKRQTNRR KHIVESGGDD
601: HISSRRRENS RKGLQVLIDE DEKDSEEKMM DKLLMHYSKK PSSYEKDNVQ EESKSRRTHL KKGESDEEMM IHQPARSRSL PAEQLAGPSE PAKTFARAAS
701: FQPERSSEAK HVHPKLPNYD DLAARFAELK GR

Arabidopsis Description

Regulator of Vps4 activity in the MVB pathway protein [Source:UniProtKB/TrEMBL;Acc:Q8RXT2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.