Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- plasma membrane 1
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P10650_001 | Banana | cytosol | 78.31 | 36.54 |
| Bra000147.1-P | Field mustard | cytosol | 62.96 | 31.15 |
| CDX93238 | Canola | cytosol | 63.49 | 30.3 |
| Bra017053.1-P | Field mustard | cytosol | 62.96 | 29.82 |
| VIT_13s0019g02260.t01 | Wine grape | cytosol | 64.02 | 29.8 |
| TraesCS2D01G266900.1 | Wheat | cytosol | 62.43 | 29.8 |
| TraesCS2A01G255800.1 | Wheat | cytosol | 62.43 | 29.8 |
| CDY07638 | Canola | cytosol | 62.96 | 29.75 |
| CDY07031 | Canola | cytosol | 62.43 | 29.57 |
| Os07t0101400-01 | Rice | cytosol | 60.32 | 28.86 |
| CDY61778 | Canola | cytosol | 62.96 | 28.2 |
| AT2G39760.1 | Thale cress | cytosol | 60.85 | 28.19 |
| PGSC0003DMT400069942 | Potato | cytosol | 59.79 | 27.7 |
| HORVU2Hr1G064920.1 | Barley | plastid | 62.96 | 27.67 |
| Solyc05g052960.2.1 | Tomato | cytosol | 59.26 | 27.45 |
| EER97813 | Sorghum | plastid | 57.14 | 26.87 |
| KRG97837 | Soybean | cytosol | 56.61 | 25.85 |
| Zm00001d007888_P002 | Maize | plastid | 58.2 | 25.58 |
| KRH31032 | Soybean | nucleus | 56.08 | 25.54 |
| GSMUA_Achr6P23740_001 | Banana | plastid | 52.91 | 24.04 |
| GSMUA_Achr6P16160_001 | Banana | plastid | 52.38 | 23.74 |
| GSMUA_Achr5P08970_001 | Banana | cytosol | 50.26 | 23.63 |
| GSMUA_Achr7P27230_001 | Banana | cytosol | 47.09 | 22.65 |
| GSMUA_Achr4P14800_001 | Banana | cytosol | 46.56 | 22.39 |
| CDX93236 | Canola | cytosol | 29.63 | 13.73 |
Protein Annotations
| Gene3D:2.60.210.10 | Gene3D:3.30.710.10 | MapMan:35.1 | InterPro:BTB/POZ_dom | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | EnsemblPlantsGene:GSMUA_Achr10G26540_001 | EnsemblPlants:GSMUA_Achr10P26540_001 | EnsemblPlants:GSMUA_Achr10T26540_001 | InterPro:IPR000210 | InterPro:IPR002083 |
| InterPro:IPR008974 | UniProt:M0RLM8 | InterPro:MATH/TRAF_dom | PFAM:PF00651 | PFscan:PS50097 | PFscan:PS50144 |
| PANTHER:PTHR24411 | PANTHER:PTHR24411:SF54 | InterPro:SKP1/BTB/POZ_sf | SMART:SM00225 | SUPFAM:SSF49599 | SUPFAM:SSF54695 |
| InterPro:TRAF-like | UniParc:UPI0002966060 | SEG:seg | : | : | : |
Description
Putative Speckle-type POZ protein-like B [Source:GMGC_GENE;Acc:GSMUA_Achr10G26540_001]
Coordinates
chr10:-:30051766..30055140
Molecular Weight (calculated)
21434.7 Da
IEP (calculated)
6.142
GRAVY (calculated)
-0.087
Length
189 amino acids
Sequence
(BLAST)
(BLAST)
001: MIDQSCKGRH KVHSHFKRSL EGGRRLWGYN RFYRRTALES SEYLNDDCLI MHCTVGVVRN CTESPNQFSV NVPSSDLGQC LKELLKSGIG SDIIFEVGDE
101: TFQAHKQILA ACSPVFNAQF FGLIGNPNVD RVVVEDVEPP FLTLLQAMLI FIYSDKLPDV HELTSSFSMY TFTTMIQHLF LAADRYGLE
101: TFQAHKQILA ACSPVFNAQF FGLIGNPNVD RVVVEDVEPP FLTLLQAMLI FIYSDKLPDV HELTSSFSMY TFTTMIQHLF LAADRYGLE
001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS
Arabidopsis Description
BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.