Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr8P16990_001 | Banana | cytosol | 93.5 | 93.5 |
| GSMUA_AchrUn_... | Banana | cytosol | 92.94 | 92.94 |
| GSMUA_AchrUn_... | Banana | cytosol | 69.63 | 82.86 |
| Os02t0746000-01 | Rice | cytosol | 85.45 | 82.2 |
| EES05529 | Sorghum | cytosol | 85.45 | 82.2 |
| TraesCS6B01G335200.1 | Wheat | cytosol | 85.17 | 81.93 |
| TraesCS6D01G285800.1 | Wheat | cytosol | 85.03 | 81.79 |
| TraesCS6A01G306600.1 | Wheat | cytosol | 84.89 | 81.66 |
| PGSC0003DMT400003338 | Potato | cytosol | 84.32 | 81.45 |
| Zm00001d018043_P001 | Maize | cytosol | 84.46 | 81.25 |
| Solyc02g087900.2.1 | Tomato | cytosol | 84.04 | 81.17 |
| KRH18483 | Soybean | cytosol | 83.33 | 80.49 |
| KRG93520 | Soybean | cytosol | 83.33 | 80.49 |
| VIT_01s0026g02230.t01 | Wine grape | cytosol | 83.19 | 80.35 |
| HORVU6Hr1G075720.2 | Barley | cytosol | 84.6 | 80.29 |
| Solyc01g010820.2.1 | Tomato | cytosol | 82.49 | 79.56 |
| PGSC0003DMT400016765 | Potato | cytosol | 81.92 | 79.02 |
| VIT_14s0108g00490.t01 | Wine grape | cytosol | 86.44 | 78.06 |
| KRH45896 | Soybean | cytosol | 80.65 | 78.01 |
| KRG99095 | Soybean | cytosol | 80.37 | 77.73 |
| AT1G69670.1 | Thale cress | cytosol | 80.08 | 77.46 |
| AT1G26830.1 | Thale cress | cytosol | 78.67 | 76.09 |
| CDY45004 | Canola | cytosol | 78.53 | 75.96 |
| CDY16196 | Canola | cytosol | 78.53 | 75.96 |
| Bra016291.1-P | Field mustard | cytosol | 78.53 | 75.96 |
| CDY46437 | Canola | cytosol | 78.39 | 75.82 |
| CDY50732 | Canola | cytosol | 78.25 | 75.68 |
| Bra024680.1-P | Field mustard | cytosol | 78.25 | 75.68 |
| KRH70713 | Soybean | cytosol | 71.33 | 69.46 |
| GSMUA_Achr2P07360_001 | Banana | mitochondrion | 34.75 | 63.57 |
| GSMUA_Achr4P22850_001 | Banana | cytosol | 40.54 | 35.74 |
| GSMUA_AchrUn_... | Banana | cytosol | 36.3 | 35.35 |
| GSMUA_Achr7P03700_001 | Banana | cytosol | 36.72 | 34.95 |
| GSMUA_Achr1P14740_001 | Banana | cytosol | 36.44 | 34.68 |
| GSMUA_Achr1P26690_001 | Banana | cytosol | 34.18 | 32.48 |
| GSMUA_Achr7P01270_001 | Banana | cytosol | 39.97 | 32.34 |
| GSMUA_Achr9P17620_001 | Banana | cytosol | 31.92 | 30.66 |
Protein Annotations
| Gene3D:1.10.10.10 | Gene3D:1.10.10.2620 | Gene3D:1.20.1310.10 | MapMan:19.2.2.8.2.1 | InterPro:Cullin_N | InterPro:Cullin_homology |
| InterPro:Cullin_homology_sf | InterPro:Cullin_neddylation_domain | InterPro:Cullin_repeat-like_dom_sf | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0019538 |
| GO:GO:0031625 | EnsemblPlantsGene:GSMUA_Achr7G18000_001 | EnsemblPlants:GSMUA_Achr7P18000_001 | EnsemblPlants:GSMUA_Achr7T18000_001 | InterPro:IPR016158 | InterPro:IPR036388 |
| UniProt:M0TII7 | PFAM:PF00888 | PFAM:PF10557 | PFscan:PS50069 | PANTHER:PTHR11932 | PANTHER:PTHR11932:SF74 |
| SMART:SM00182 | SMART:SM00884 | SUPFAM:SSF46785 | SUPFAM:SSF74788 | SUPFAM:SSF75632 | UniParc:UPI00029660B8 |
| InterPro:WH-like_DNA-bd_sf | InterPro:WH_DNA-bd_sf | : | : | : | : |
Description
Cullin-3B [Source:GMGC_GENE;Acc:GSMUA_Achr7G18000_001]
Coordinates
chr7:+:20826991..20833674
Molecular Weight (calculated)
82094.7 Da
IEP (calculated)
7.636
GRAVY (calculated)
-0.509
Length
708 amino acids
Sequence
(BLAST)
(BLAST)
001: MSAQKKRTFK IEAFKHRVEL DPKYAERTWK VLEHAIHEIY NHNASGLSFE ELYRNAYNMV LHKYGEKLYS GLVTTMSGHL KEIAKSIEDS QGGLFLEELD
101: RKWGDHNKAL QMIRDILMYM DRTFVPGNHK TPVHELGLNL WRDNIIRSGK IQTRLLDTLL DLIHRERTGE VINRSLMRNI TKMLMDLGSS VYQEDFEKPF
201: LEVSASFYSG ESQQLIECCD CGEYLRKAER RLTEETERVS HYLDVKSEVK ITSVVEGEMI ANHMQRLVHM ENSGLVNMLV DDRYEDLSRM YNLFRRVPDG
301: LSTVRDVMTS HLRETGKQLV SDPERLKDPV DFVQHLLDEK DKYDKIISKA FNNDKSFQNA LNSSFEYFIN LNNRSPEFIS LYVDDKLRKG LKGVSEEDVE
401: VVLDKVMMLF RYLQEKDVFE KYYKQHLAKR LLSGKTASDD AERSMIVKLK TECGYQFTSK LEGMFTDMKT SVDTMQGFYA NQYSETGDGP TLAVQVLTTG
501: SWPTQPSGPC NLPAEILGIC DKFRTYYLGT HTGRRLTWQT NMGTADIKAT FGKGQKHELN VSTYQMCILM LFNSADQLTY REIEQATEIP APDLKRCLQS
601: LACVKGKNVL RKEPMSKDIA EDDAFYFNDK FTSKFIKVKI GTIEAAIVRI MKSRRVLDHN TIVTEVTSQL QSRFLPNPVV IKKRIESLIE REFLERDKTD
701: RKLYRYLA
101: RKWGDHNKAL QMIRDILMYM DRTFVPGNHK TPVHELGLNL WRDNIIRSGK IQTRLLDTLL DLIHRERTGE VINRSLMRNI TKMLMDLGSS VYQEDFEKPF
201: LEVSASFYSG ESQQLIECCD CGEYLRKAER RLTEETERVS HYLDVKSEVK ITSVVEGEMI ANHMQRLVHM ENSGLVNMLV DDRYEDLSRM YNLFRRVPDG
301: LSTVRDVMTS HLRETGKQLV SDPERLKDPV DFVQHLLDEK DKYDKIISKA FNNDKSFQNA LNSSFEYFIN LNNRSPEFIS LYVDDKLRKG LKGVSEEDVE
401: VVLDKVMMLF RYLQEKDVFE KYYKQHLAKR LLSGKTASDD AERSMIVKLK TECGYQFTSK LEGMFTDMKT SVDTMQGFYA NQYSETGDGP TLAVQVLTTG
501: SWPTQPSGPC NLPAEILGIC DKFRTYYLGT HTGRRLTWQT NMGTADIKAT FGKGQKHELN VSTYQMCILM LFNSADQLTY REIEQATEIP APDLKRCLQS
601: LACVKGKNVL RKEPMSKDIA EDDAFYFNDK FTSKFIKVKI GTIEAAIVRI MKSRRVLDHN TIVTEVTSQL QSRFLPNPVV IKKRIESLIE REFLERDKTD
701: RKLYRYLA
001: MSNQKKRNFQ IEAFKQRVVV DPKYADKTWK ILEHAIHEIY NHNASGLSFE ELYRNAYNMV LHKYGDKLYT GLVTTMTFHL KEICKSIEEA QGGAFLELLN
101: RKWNDHNKAL QMIRDILMYM DRTYVSTTKK THVHELGLHL WRDNVVYSSK IQTRLLNTLL DLVHKERTGE VIDRVLMRNV IKMFMDLGES VYQDDFEKPF
201: LEASAEFYKV ESMEFIESCD CGEYLKKAEK PLVEEVERVV NYLDAKSEAK ITSVVEREMI ANHVQRLVHM ENSGLVNMLL NDKYEDMGRM YSLFRRVANG
301: LVTVRDVMTL HLREMGKQLV TDPEKSKDPV EFVQRLLDER DKYDRIINMA FNNDKTFQNA LNSSFEYFVN LNTRSPEFIS LFVDDKLRKG LKGVGEEDVD
401: LILDKVMMLF RYLQEKDVFE KYYKQHLAKR LLSGKTVSDD AERNLIVKLK TECGYQFTSK LEGMFTDMKT SHDTLLGFYN SHPELSEGPT LVVQVLTTGS
501: WPTQPTIQCN LPAEVSVLCE KFRSYYLGTH TGRRLSWQTN MGTADIKAVF GKGQKHELNV STFQMCVLML FNNSDRLSYK EIEQATEIPT PDLKRCLQSM
601: ACVKGKNVLR KEPMSKEIAE EDWFVVNDRF ASKFYKVKIG TVVAQKETEP EKQETRQRVE EDRKPQIEAA IVRIMKSRRV LDHNNIIAEV TKQLQTRFLA
701: NPTEIKKRIE SLIERDFLER DNTDRKLYRY LA
101: RKWNDHNKAL QMIRDILMYM DRTYVSTTKK THVHELGLHL WRDNVVYSSK IQTRLLNTLL DLVHKERTGE VIDRVLMRNV IKMFMDLGES VYQDDFEKPF
201: LEASAEFYKV ESMEFIESCD CGEYLKKAEK PLVEEVERVV NYLDAKSEAK ITSVVEREMI ANHVQRLVHM ENSGLVNMLL NDKYEDMGRM YSLFRRVANG
301: LVTVRDVMTL HLREMGKQLV TDPEKSKDPV EFVQRLLDER DKYDRIINMA FNNDKTFQNA LNSSFEYFVN LNTRSPEFIS LFVDDKLRKG LKGVGEEDVD
401: LILDKVMMLF RYLQEKDVFE KYYKQHLAKR LLSGKTVSDD AERNLIVKLK TECGYQFTSK LEGMFTDMKT SHDTLLGFYN SHPELSEGPT LVVQVLTTGS
501: WPTQPTIQCN LPAEVSVLCE KFRSYYLGTH TGRRLSWQTN MGTADIKAVF GKGQKHELNV STFQMCVLML FNNSDRLSYK EIEQATEIPT PDLKRCLQSM
601: ACVKGKNVLR KEPMSKEIAE EDWFVVNDRF ASKFYKVKIG TVVAQKETEP EKQETRQRVE EDRKPQIEAA IVRIMKSRRV LDHNNIIAEV TKQLQTRFLA
701: NPTEIKKRIE SLIERDFLER DNTDRKLYRY LA
Arabidopsis Description
CUL3BCullin-3B [Source:UniProtKB/Swiss-Prot;Acc:Q9C9L0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.