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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • plastid 2
  • cytosol 2
  • plasma membrane 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plasma membrane, plastid
BaCelLo:nucleus
iPSORT:plastid
MultiLoc:cytosol
Plant-mPloc:plasma membrane
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
GSMUA_Achr5P29570_001
GSMUA_Achr7P18000_001
GSMUA_Achr8P16990_001
GSMUA_Achr9P17620_001
GSMUA_AchrUn_...
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G01640.1 GSMUA_Achr5P29570_001 AT1G01640.1 21798944
AT1G01640.1 GSMUA_Achr7P18000_001 AT1G26830.1 15772280
AT1G01640.1 GSMUA_Achr8P16990_001 AT1G26830.1 15772280
AT1G01640.1 GSMUA_AchrUn_... AT1G26830.1 15772280
AT1G01640.1 GSMUA_AchrUn_... AT1G26830.1 15772280
AT1G01640.1 GSMUA_Achr9P17620_001 AT4G02570.1 15659098
AT1G01640.1 GSMUA_Achr9P17620_001 AT4G02570.1 21798944
AT5G48510.1 GSMUA_Achr7P18000_001 AT1G26830.1 15772280
AT5G48510.1 GSMUA_Achr8P16990_001 AT1G26830.1 15772280
AT5G48510.1 GSMUA_AchrUn_... AT1G26830.1 15772280
AT5G48510.1 GSMUA_AchrUn_... AT1G26830.1 15772280
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400071906 Potato cytosol 37.01 51.74
VIT_13s0067g02290.t01 Wine grape cytosol, plastid 48.4 50.37
Os12t0111500-02 Rice cytosol 47.69 48.73
TraesCS4D01G116200.2 Wheat cytosol 49.47 48.6
TraesCS4A01G196800.2 Wheat cytosol 49.11 48.25
Os11t0111900-01 Rice cytosol 46.98 48.0
EES09114 Sorghum cytosol 46.98 47.65
TraesCS4B01G118500.1 Wheat cytosol 48.4 47.55
Solyc06g050860.2.1 Tomato cytosol 46.98 47.31
HORVU4Hr1G022110.3 Barley cytosol 47.69 47.02
Zm00001d036840_P001 Maize cytosol 48.4 46.9
PGSC0003DMT400097598 Potato cytosol 32.03 46.39
AT1G01640.1 Thale cress cytosol 32.03 43.48
KRH31216 Soybean cytosol, plastid 40.57 42.38
KRG97659 Soybean cytosol, plastid 40.21 42.01
CDX90048 Canola cytosol 30.96 41.63
AT3G56230.1 Thale cress cytosol 40.93 40.78
CDX97765 Canola cytosol 17.08 40.68
CDX72156 Canola cytosol 40.93 40.64
CDY27231 Canola cytosol 40.57 40.28
Bra007229.1-P Field mustard cytosol 40.57 40.28
Bra033246.1-P Field mustard cytosol 28.83 38.76
Solyc05g052290.1.1 Tomato cytosol 36.65 38.72
CDY24906 Canola cytosol 17.44 36.84
CDY07220 Canola cytosol 26.33 36.63
Bra037339.1-P Field mustard cytosol 24.91 34.48
CDY51160 Canola cytosol 24.56 33.99
Bra021691.1-P Field mustard cytosol 24.2 33.83
CDY07606 Canola cytosol 23.84 32.06
Bra000186.1-P Field mustard cytosol 23.84 32.06
CDY24905 Canola cytosol 23.84 32.06
Bra000185.1-P Field mustard cytosol 23.49 31.88
AT4G04090.1 Thale cress cytosol 21.35 31.25
CDY19060 Canola mitochondrion 18.86 30.99
CDY23905 Canola cytosol 22.06 30.69
AT2G40450.1 Thale cress cytosol 22.78 30.62
CDY07607 Canola cytosol 23.84 29.78
CDY32006 Canola nucleus 23.84 29.0
CDY24907 Canola cytosol 24.56 28.63
CDX79986 Canola cytosol 19.93 28.57
Bra037082.1-P Field mustard cytosol, nucleus, plastid 16.01 28.48
Bra004570.1-P Field mustard cytosol 21.0 27.83
CDY08283 Canola cytosol 21.35 27.65
Bra004569.1-P Field mustard cytosol 19.57 27.36
CDY31600 Canola cytosol 21.0 27.31
CDX79987 Canola cytosol 19.22 27.14
CDY23907 Canola cytosol 18.86 26.5
CDY32004 Canola cytosol 18.15 25.63
AT5G48510.1 Thale cress cytosol 20.28 25.45
GSMUA_Achr8P32570_001 Banana cytosol 20.64 23.48
AT2G05330.1 Thale cress cytosol 17.79 23.26
Bra017002.1-P Field mustard cytosol 19.93 19.79
CDY52933 Canola cytosol 18.15 17.29
Bra021693.1-P Field mustard cytosol 23.49 16.67
CDX67639 Canola cytosol 25.98 14.23
Bra003233.1-P Field mustard cytosol 25.62 14.04
Protein Annotations
EnsemblPlants:GSMUA_Achr5P29570_001EnsemblPlants:GSMUA_Achr5T29570_001EnsemblPlantsGene:GSMUA_Achr5G29570_001Gene3D:1.25.40.420Gene3D:3.30.710.10GO:GO:0003674
GO:GO:0005488GO:GO:0005515InterPro:BTB/POZ_domInterPro:IPR000210InterPro:SKP1/BTB/POZ_sfncoils:Coil
PANTHER:PTHR24413PANTHER:PTHR24413:SF164PFAM:PF00651PFscan:PS50097SEG:segSMART:SM00225
SUPFAM:SSF54695UniParc:UPI0002949F01UniProt:M0T2T1MapMan:35.1::
Description
BTB9 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr5G29570_001]
Coordinates
chr5:+:29222823..29224746
Molecular Weight (calculated)
32091.8 Da
IEP (calculated)
6.054
GRAVY (calculated)
-0.267
Length
281 amino acids
Sequence
(BLAST)
001: MDCCVCSPMA SVYRPPRNTI CASCYQGARS MIAFLNEHDS YREHITIFCM FLRRKVSIEM AVQGISHAFE KMKEMEEREK DMKEKLRFLD GLIALRERIH
101: TDILVKPGSG PPIPAHRALL AAKSEIFRTM LMSDECKAPA EDTISFPELS HDELKCLVEF LYSGSLPEWS TEQHSYSMLI AADKYDIPFL RKYCERRILA
201: ALRPSNALEV LQVAEVCSDA ELKEQAMNLI TKHAEDVVFS ARYDELARNN AHLCVEITRA LLTEMKDKRD AATTSPNETW S
Best Arabidopsis Sequence Match ( AT3G56230.1 )
(BLAST)
001: MDCSICTTMP SILRPPRNTI CGSCYEGART TIALLKKLEG SKEDRHDKSN HNSTINNGSS ISSSPLFSCE PQPLEKVIKW MKNMKETEEE QKKRIVFLSS
101: FVSGFKEQLH ADILLKPGDD GPPIPAHRAL LASKSEIFKN ILDSDGCKTA PEYAITLQEL NSEQLQALLE FLYTGTLASD KLEKNVYALF IAADKYMIHY
201: LQELCEQYML SSLDISSVLN VLDVSDLGSS KTLKEACVGF VVRNMDDVVF SDKYEPFSQK NQHLCVEITR AFLMETRSKR RD
Arabidopsis Description
BTB/POZ domain-containing protein At3g56230 [Source:UniProtKB/Swiss-Prot;Acc:Q9LYL9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.