Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX97765 | Canola | cytosol | 55.64 | 62.71 |
| CDY24905 | Canola | cytosol | 86.47 | 55.02 |
| CDY07606 | Canola | cytosol | 84.21 | 53.59 |
| CDY07607 | Canola | cytosol | 85.71 | 50.67 |
| CDY24907 | Canola | cytosol | 88.72 | 48.96 |
| AT2G40450.1 | Thale cress | cytosol | 74.44 | 47.37 |
| CDY23907 | Canola | cytosol | 63.16 | 42.0 |
| CDX79987 | Canola | cytosol | 60.9 | 40.7 |
| CDY08283 | Canola | cytosol | 64.66 | 39.63 |
| CDX79986 | Canola | cytosol | 55.64 | 37.76 |
| CDY23905 | Canola | cytosol | 56.39 | 37.13 |
| CDY31600 | Canola | cytosol | 60.15 | 37.04 |
| CDY19060 | Canola | mitochondrion | 39.1 | 30.41 |
| CDY32004 | Canola | cytosol | 45.11 | 30.15 |
| CDY07220 | Canola | cytosol | 41.35 | 27.23 |
| CDX90048 | Canola | cytosol | 42.11 | 26.79 |
| CDY51160 | Canola | cytosol | 40.6 | 26.6 |
| CDY52933 | Canola | cytosol | 42.11 | 18.98 |
| CDX72156 | Canola | cytosol | 38.35 | 18.02 |
| CDY27231 | Canola | cytosol | 38.35 | 18.02 |
| GSMUA_Achr5P29570_001 | Banana | cytosol | 36.84 | 17.44 |
| TraesCS4D01G116200.2 | Wheat | cytosol | 31.58 | 14.69 |
| CDY34003 | Canola | nucleus | 18.8 | 14.45 |
| TraesCS4A01G196800.2 | Wheat | cytosol | 30.83 | 14.34 |
| Os11t0111900-01 | Rice | cytosol | 29.32 | 14.18 |
| Os12t0111500-02 | Rice | cytosol | 29.32 | 14.18 |
| TraesCS4B01G118500.1 | Wheat | cytosol | 30.08 | 13.99 |
| EES09114 | Sorghum | cytosol | 28.57 | 13.72 |
| HORVU4Hr1G022110.3 | Barley | cytosol | 29.32 | 13.68 |
| Zm00001d036840_P001 | Maize | cytosol | 29.32 | 13.45 |
| CDX83137 | Canola | cytosol | 24.81 | 12.36 |
| CDX67639 | Canola | cytosol | 45.86 | 11.89 |
| CDY32006 | Canola | nucleus | 13.53 | 7.79 |
| CDY34002 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY24906 | EnsemblPlantsGene:GSBRNA2T00028690001 | Gene3D:3.30.710.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:BTB/POZ_dom | InterPro:IPR000210 | InterPro:SKP1/BTB/POZ_sf | PANTHER:PTHR24413 | PANTHER:PTHR24413:SF164 | PFAM:PF00651 |
| PFscan:PS50097 | ProteinID:CDY24906 | ProteinID:CDY24906.1 | SMART:SM00225 | SUPFAM:SSF54695 | UniParc:UPI0004EED932 |
| UniProt:A0A078GHQ6 | MapMan:35.1 | : | : | : | : |
Description
BnaC03g22660DBnaC03g22660D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GHQ6]
Coordinates
chrLK032166:+:71217..71946
Molecular Weight (calculated)
15027.2 Da
IEP (calculated)
8.467
GRAVY (calculated)
-0.290
Length
133 amino acids
Sequence
(BLAST)
(BLAST)
001: MATQNNKEIF LGGLKKLFKE QWQADVLLKA GNSDKGATIS AHKLVLASRS MVLKKIMESD EFKASSSKLE TVTFSEMKHE ELEALVEFMY SIDGSISSES
101: FKKHVRPLYL AADKYEIPHL RDLCRSQLIS SLN
101: FKKHVRPLYL AADKYEIPHL RDLCRSQLIS SLN
1: MASQTNKELF VGGLARILKE QRQVDVRLKA GDSDQKGVSI SAHKLVLSAR SEVFKMILET EEIKATTTLD TITLSELKHT ELVALVE
Arabidopsis Description
Putative BTB/POZ domain-containing protein At3g29740 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRQ1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.