CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY07606	Canola	cytosol	95.69	95.69
CDY24906	Canola	cytosol	55.02	86.47
CDY07607	Canola	cytosol	77.03	71.56
AT2G40450.1	Thale cress	cytosol	70.81	70.81
CDY24907	Canola	cytosol	80.38	69.71
CDX97765	Canola	cytosol	37.32	66.1
CDY08283	Canola	cytosol	65.07	62.67
CDY23907	Canola	cytosol	56.46	59.0
CDY31600	Canola	cytosol	60.77	58.8
CDX79987	Canola	cytosol	55.98	58.79
CDY23905	Canola	cytosol	52.15	53.96
CDX79986	Canola	cytosol	49.76	53.06
CDY19060	Canola	mitochondrion	40.67	49.71
CDY32004	Canola	cytosol	38.76	40.7
CDX90048	Canola	cytosol	37.32	37.32
CDY07220	Canola	cytosol	33.49	34.65
CDY51160	Canola	cytosol	33.01	33.99
GSMUA_Achr5P29570_001	Banana	cytosol	32.06	23.84
CDY27231	Canola	cytosol	31.1	22.97
CDX72156	Canola	cytosol	31.1	22.97
CDY34002	Canola	cytosol	7.18	21.13
TraesCS4D01G116200.2	Wheat	cytosol	28.23	20.63
CDY52933	Canola	cytosol	28.71	20.34
TraesCS4A01G196800.2	Wheat	cytosol	27.75	20.28
EES09114	Sorghum	cytosol	26.32	19.86
CDX83137	Canola	cytosol	25.36	19.85
Zm00001d036840_P001	Maize	cytosol	27.27	19.66
HORVU4Hr1G022110.3	Barley	cytosol	26.79	19.65
TraesCS4B01G118500.1	Wheat	cytosol	26.79	19.58
Os11t0111900-01	Rice	cytosol	24.4	18.55
Os12t0111500-02	Rice	cytosol	24.4	18.55
CDX67639	Canola	cytosol	39.23	15.98
CDY34003	Canola	nucleus	12.44	15.03
CDY32006	Canola	nucleus	13.88	12.55

Protein Annotations

EnsemblPlants:CDY24905	EnsemblPlantsGene:GSBRNA2T00028689001	Gene3D:1.25.40.420	Gene3D:3.30.710.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:BTB/POZ_dom	InterPro:IPR000210	InterPro:SKP1/BTB/POZ_sf	PANTHER:PTHR24413	PANTHER:PTHR24413:SF164
PFAM:PF00651	PFscan:PS50097	ProteinID:CDY24905	ProteinID:CDY24905.1	SEG:seg	SMART:SM00225
SUPFAM:SSF54695	UniParc:UPI0004EDFEAD	UniProt:A0A078GEG2	MapMan:35.1	:	:

Description

BnaC03g22670DBnaC03g22670D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GEG2]

Coordinates

chrLK032166:+:67282..68449

Molecular Weight (calculated)

23431.2 Da

IEP (calculated)

7.113

GRAVY (calculated)

-0.125

Length

209 amino acids

Sequence
(BLAST)

001: MATQSNKEIF LGGLRKLFEE QWQVDVLLKA GNSDECAAIS AHKLVLASRS MVLKKMMESD ELKSSSKLET VTFSEMRQEE LEALVEFMYS VDGSISSESL
101: KKHVRSLYLA ADKYEIPHLR DLCRKHLISS LNSSNALNIL ELAQIPFDKA LNDAAFTTIK NNISSIASSA EFKLFVVNHP DLSVEIMKAS LIRPRTTASC
201: HYCGSSFRY

Best Arabidopsis Sequence Match ( AT2G40450.1 )
(BLAST)

001: MATQSNKEAF LGGFKKLLNE QWQADVRLKA GDSDETTSIF AHKLVLVARS EVFKKILESD EFKASSKQME TVTLSEMKHE ELEAFVEFIY RVDGSICSAS
101: LKKHARSLFH AADKYEIPHL RDLCRNELIS SLNSSNALSI LELAQIPFDK ALNDPAFTTI ITNISTIASG DEFKLFVANH PNLAVDIMKA SITRLSTSRK
201: ICGYCNRYY

Arabidopsis Description

Putative BTB/POZ domain-containing protein At2g40450 [Source:UniProtKB/Swiss-Prot;Acc:O22890]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.