Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY23905 | Canola | cytosol | 90.82 | 88.12 |
| Bra004570.1-P | Field mustard | cytosol | 90.82 | 83.96 |
| CDY24906 | Canola | cytosol | 37.76 | 55.64 |
| CDX97765 | Canola | cytosol | 31.63 | 52.54 |
| CDY24905 | Canola | cytosol | 53.06 | 49.76 |
| CDY07606 | Canola | cytosol | 52.04 | 48.8 |
| CDY23907 | Canola | cytosol | 47.96 | 47.0 |
| CDX79987 | Canola | cytosol | 46.94 | 46.23 |
| CDY07607 | Canola | cytosol | 53.06 | 46.22 |
| CDY08283 | Canola | cytosol | 51.02 | 46.08 |
| CDY19060 | Canola | mitochondrion | 38.27 | 43.86 |
| CDY31600 | Canola | cytosol | 47.45 | 43.06 |
| CDY24907 | Canola | cytosol | 52.55 | 42.74 |
| CDY32004 | Canola | cytosol | 37.24 | 36.68 |
| CDY51160 | Canola | cytosol | 36.22 | 34.98 |
| CDY07220 | Canola | cytosol | 35.71 | 34.65 |
| CDX90048 | Canola | cytosol | 33.67 | 31.58 |
| CDX72156 | Canola | cytosol | 32.65 | 22.61 |
| CDY27231 | Canola | cytosol | 32.65 | 22.61 |
| CDY52933 | Canola | cytosol | 33.67 | 22.37 |
| Zm00001d036840_P001 | Maize | cytosol | 29.59 | 20.0 |
| TraesCS4D01G116200.2 | Wheat | cytosol | 29.08 | 19.93 |
| GSMUA_Achr5P29570_001 | Banana | cytosol | 28.57 | 19.93 |
| TraesCS4A01G196800.2 | Wheat | cytosol | 28.57 | 19.58 |
| HORVU4Hr1G022110.3 | Barley | cytosol | 28.06 | 19.3 |
| TraesCS4B01G118500.1 | Wheat | cytosol | 28.06 | 19.23 |
| Os11t0111900-01 | Rice | cytosol | 26.53 | 18.91 |
| EES09114 | Sorghum | cytosol | 26.53 | 18.77 |
| Os12t0111500-02 | Rice | cytosol | 26.02 | 18.55 |
| CDY34002 | Canola | cytosol | 6.63 | 18.31 |
| CDX83137 | Canola | cytosol | 22.96 | 16.85 |
| CDX67639 | Canola | cytosol | 38.78 | 14.81 |
| CDY34003 | Canola | nucleus | 11.73 | 13.29 |
| CDY32006 | Canola | nucleus | 13.27 | 11.26 |
Protein Annotations
| EnsemblPlants:CDX79986 | EnsemblPlantsGene:GSBRNA2T00132852001 | Gene3D:3.30.710.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:BTB/POZ_dom | InterPro:IPR000210 | InterPro:SKP1/BTB/POZ_sf | PANTHER:PTHR24413 | PANTHER:PTHR24413:SF164 | PFAM:PF00651 |
| PFscan:PS50097 | ProteinID:CDX79986 | ProteinID:CDX79986.1 | SMART:SM00225 | SUPFAM:SSF54695 | UniParc:UPI0004EEB1F6 |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaA05g01700D
Coordinates
chrLK031819:+:1175880..1178066
Molecular Weight (calculated)
22005.6 Da
IEP (calculated)
8.248
GRAVY (calculated)
-0.037
Length
196 amino acids
Sequence
(BLAST)
(BLAST)
001: MATDVSSSGF AKILKQKWHT DLLLKAGDSN GFAAISAHKL VIAARSEVFK KMLESKATKA SSDQTLFFSE MRHEELETLI EFMYNDHGLV SSSKLKKHVR
101: SLYLAAQRYE IPHLRDLCRN ELISSLSSSN ALDELSQVPL DKPLTDAVLS FIARNINTFL DSCEFKMFVA RNPNLAVEIL DINRAAFLNP VMIAIR
101: SLYLAAQRYE IPHLRDLCRN ELISSLSSSN ALDELSQVPL DKPLTDAVLS FIARNINTFL DSCEFKMFVA RNPNLAVEIL DINRAAFLNP VMIAIR
001: MATQSNKEAF LGGFKKLLNE QWQADVRLKA GDSDETTSIF AHKLVLVARS EVFKKILESD EFKASSKQME TVTLSEMKHE ELEAFVEFIY RVDGSICSAS
101: LKKHARSLFH AADKYEIPHL RDLCRNELIS SLNSSNALSI LELAQIPFDK ALNDPAFTTI ITNISTIASG DEFKLFVANH PNLAVDIMKA SITRLSTSRK
201: ICGYCNRYY
101: LKKHARSLFH AADKYEIPHL RDLCRNELIS SLNSSNALSI LELAQIPFDK ALNDPAFTTI ITNISTIASG DEFKLFVANH PNLAVDIMKA SITRLSTSRK
201: ICGYCNRYY
Arabidopsis Description
Putative BTB/POZ domain-containing protein At2g40450 [Source:UniProtKB/Swiss-Prot;Acc:O22890]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.