Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G08455.1 | CDY16196 | AT1G26830.1 | 15749712 |
| AT4G08455.1 | CDY45004 | AT1G26830.1 | 15749712 |
| AT4G08455.1 | CDY46437 | AT1G26830.1 | 15749712 |
| AT4G08455.1 | CDY50732 | AT1G26830.1 | 15749712 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX83137 | Canola | cytosol | 97.18 | 25.84 |
| AT4G08455.1 | Thale cress | cytosol | 88.73 | 23.33 |
| TraesCS6A01G046100.1 | Wheat | cytosol | 45.07 | 21.62 |
| VIT_18s0001g01590.t01 | Wine grape | cytosol | 67.61 | 18.18 |
| Os07t0258700-01 | Rice | cytosol | 56.34 | 16.26 |
| Solyc02g032510.2.1 | Tomato | cytosol | 61.97 | 15.77 |
| OQU88783 | Sorghum | cytosol | 53.52 | 14.84 |
| GSMUA_Achr8P32570_001 | Banana | cytosol | 50.7 | 14.57 |
| Zm00001d019328_P003 | Maize | cytosol | 54.93 | 14.55 |
| TraesCS6A01G045900.1 | Wheat | cytosol | 46.48 | 12.84 |
| TraesCS6D01G053100.1 | Wheat | cytosol | 46.48 | 12.84 |
| TraesCS6B01G062000.1 | Wheat | cytosol | 45.07 | 12.65 |
| HORVU6Hr1G009330.1 | Barley | cytosol | 46.48 | 12.41 |
| KRH53314 | Soybean | cytosol, mitochondrion | 39.44 | 10.77 |
| KRH64603 | Soybean | cytosol | 35.21 | 9.69 |
| CDY07606 | Canola | cytosol | 22.54 | 7.66 |
| CDX90048 | Canola | cytosol | 22.54 | 7.66 |
| CDY19060 | Canola | mitochondrion | 18.31 | 7.6 |
| CDY07607 | Canola | cytosol | 23.94 | 7.56 |
| CDY31600 | Canola | cytosol | 22.54 | 7.41 |
| CDY24905 | Canola | cytosol | 21.13 | 7.18 |
| CDY23905 | Canola | cytosol | 19.72 | 6.93 |
| CDY24907 | Canola | cytosol | 22.54 | 6.64 |
| CDX79986 | Canola | cytosol | 18.31 | 6.63 |
| CDY32006 | Canola | nucleus | 19.72 | 6.06 |
| CDY32004 | Canola | cytosol | 16.9 | 6.03 |
| CDY23907 | Canola | cytosol | 16.9 | 6.0 |
| CDX79987 | Canola | cytosol | 15.49 | 5.53 |
| CDY27231 | Canola | cytosol | 21.13 | 5.3 |
| CDX72156 | Canola | cytosol | 21.13 | 5.3 |
| CDY08283 | Canola | cytosol | 15.49 | 5.07 |
| CDY51160 | Canola | cytosol | 12.68 | 4.43 |
| CDY52933 | Canola | cytosol | 16.9 | 4.07 |
| CDY07220 | Canola | cytosol | 11.27 | 3.96 |
| CDX67639 | Canola | cytosol | 16.9 | 2.34 |
| CDY24906 | Canola | cytosol | 0.0 | 0.0 |
| CDX97765 | Canola | cytosol | 0.0 | 0.0 |
| CDY34003 | Canola | nucleus | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY34002 | EnsemblPlantsGene:GSBRNA2T00055857001 | Gene3D:1.25.40.420 | PANTHER:PTHR24413 | PANTHER:PTHR24413:SF131 | ProteinID:CDY34002 |
| ProteinID:CDY34002.1 | UniParc:UPI0004EE1F1C | UniProt:A0A078H8W0 | MapMan:35.1 | : | : |
Description
BnaC03g28130DBnaC03g28130D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H8W0]
Coordinates
chrLK032326:-:17443..17905
Molecular Weight (calculated)
8115.7 Da
IEP (calculated)
6.238
GRAVY (calculated)
-0.463
Length
71 amino acids
Sequence
(BLAST)
(BLAST)
1: MTYAFAHQHN AKHVRDAALL QIIENMENVT KREEYMELVE KEPRLIVEIY EAYLSKQVNT AAGGTSTSKT C
001: MRRHHHRCQI GSDSETGSES DSDTDTPMRC ISCREEYLPR NAGTCKECYV EAGETEEELK REIDDLKAKV AFLRLSSSLD HGTSSTSRSF TDVVLIASED
101: NAGSPPIPAH KSVLVSRSPV FKAMLENEME ESLSGTIKIS DVSYDALRTF VYYLYTAEAC LDEQMACDLL VMSEKYQVKH LKSYCERFLV TKLSPDNSLM
201: TYAFAHQHNA KHVLDAALSQ IVENMDKLTK REEYMELVEK DPRLIVEIYE AYLSKQVNTA AGGTSTSKTS
101: NAGSPPIPAH KSVLVSRSPV FKAMLENEME ESLSGTIKIS DVSYDALRTF VYYLYTAEAC LDEQMACDLL VMSEKYQVKH LKSYCERFLV TKLSPDNSLM
201: TYAFAHQHNA KHVLDAALSQ IVENMDKLTK REEYMELVEK DPRLIVEIYE AYLSKQVNTA AGGTSTSKTS
Arabidopsis Description
BTB/POZ domain-containing protein [Source:TAIR;Acc:AT4G08455]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.