Factsheet for Os07t0258700-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os02t0746000-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G08455.1	Os02t0746000-01	AT1G26830.1	15749712
AT4G08455.1	Os02t0746000-01	AT1G69670.1	15749712

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU88783	Sorghum	cytosol	84.96	81.64
Zm00001d019328_P003	Maize	cytosol	85.37	78.36
TraesCS6B01G062000.1	Wheat	cytosol	78.86	76.68
TraesCS6A01G046100.1	Wheat	cytosol	45.53	75.68
TraesCS6D01G053100.1	Wheat	cytosol	78.46	75.1
TraesCS6A01G045900.1	Wheat	cytosol	78.46	75.1
HORVU6Hr1G009330.1	Barley	cytosol	77.24	71.43
GSMUA_Achr8P32570_001	Banana	cytosol	69.92	69.64
VIT_18s0001g01590.t01	Wine grape	cytosol	62.2	57.95
CDY34002	Canola	cytosol	16.26	56.34
CDX83137	Canola	cytosol	60.98	56.18
AT4G08455.1	Thale cress	cytosol	60.98	55.56
CDY34003	Canola	nucleus	39.02	55.49
Solyc02g032510.2.1	Tomato	cytosol	60.98	53.76
KRH64603	Soybean	cytosol	51.22	48.84
KRH53314	Soybean	cytosol, mitochondrion	50.81	48.08
Os12t0111500-02	Rice	cytosol	21.95	19.64
Os11t0111900-01	Rice	cytosol	21.54	19.27

Protein Annotations

Gene3D:1.25.40.420	Gene3D:3.30.710.10	MapMan:35.1	EntrezGene:4342863	EMBL:AK069407	EMBL:AK106061
ProteinID:BAC21331.1	ProteinID:BAD30212.1	ProteinID:BAF21230.1	ProteinID:BAT00883.1	InterPro:BTB/POZ_dom	ncoils:Coil
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0019005
GO:GO:0019538	GO:GO:0030162	GO:GO:0031625	GO:GO:0043161	InterPro:IPR000210	EnsemblPlantsGene:Os07g0258700
EnsemblPlants:Os07t0258700-01	PFAM:PF00651	PFscan:PS50097	PANTHER:PTHR24413	PANTHER:PTHR24413:SF131	UniProt:Q7F241
InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SUPFAM:SSF54695	UniParc:UPI00000AC60A	RefSeq:XP_015645062.1	SEG:seg

Description

BTB domain containing protein. (Os07t0258700-01)

Coordinates

chr7:+:8989136..8992724

Molecular Weight (calculated)

27991.9 Da

IEP (calculated)

4.649

GRAVY (calculated)

-0.484

Length

246 amino acids

Sequence
(BLAST)

001: MWCQSCKEEY EEEDAGTCKE CYEEASETEE ELKREIDDLR SRLHFLRLPS PSLDASSLSH SDLLLHAIPA DAPARPDTPA VPAHRVILAS RSPVFRAMLE
101: NEMEESRSGI IKIYDVSYDV LRAFVHYMYT AEALLDEQMA SDLLVLAEKY EVKNLKAYCE KFLTSKVSND NAITHYAFAH RHSAKQLLET SLAAIMDNMS
201: TLADREEYKE LVEKDPRLVV EIYEAYLNRQ VNTAAGKETD SSSRKG

Best Arabidopsis Sequence Match ( AT4G08455.1 )
(BLAST)

001: MRRHHHRCQI GSDSETGSES DSDTDTPMRC ISCREEYLPR NAGTCKECYV EAGETEEELK REIDDLKAKV AFLRLSSSLD HGTSSTSRSF TDVVLIASED
101: NAGSPPIPAH KSVLVSRSPV FKAMLENEME ESLSGTIKIS DVSYDALRTF VYYLYTAEAC LDEQMACDLL VMSEKYQVKH LKSYCERFLV TKLSPDNSLM
201: TYAFAHQHNA KHVLDAALSQ IVENMDKLTK REEYMELVEK DPRLIVEIYE AYLSKQVNTA AGGTSTSKTS

Arabidopsis Description

BTB/POZ domain-containing protein [Source:TAIR;Acc:AT4G08455]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.