Factsheet for Zm00001d019328_P003

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d018043_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G08455.1	Zm00001d018043_P001	AT1G26830.1	15749712
AT4G08455.1	Zm00001d018043_P001	AT1G69670.1	15749712

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU88783	Sorghum	cytosol	86.19	90.23
Os07t0258700-01	Rice	cytosol	78.36	85.37
TraesCS6B01G062000.1	Wheat	cytosol	74.63	79.05
TraesCS6D01G053100.1	Wheat	cytosol	73.88	77.04
TraesCS6A01G045900.1	Wheat	cytosol	73.88	77.04
TraesCS6A01G046100.1	Wheat	cytosol	42.54	77.03
HORVU6Hr1G009330.1	Barley	cytosol	73.13	73.68
GSMUA_Achr8P32570_001	Banana	cytosol	63.81	69.23
VIT_18s0001g01590.t01	Wine grape	cytosol	57.46	58.33
CDY34002	Canola	cytosol	14.55	54.93
Solyc02g032510.2.1	Tomato	cytosol	57.09	54.84
CDX83137	Canola	cytosol	54.48	54.68
AT4G08455.1	Thale cress	cytosol	54.48	54.07
CDY34003	Canola	nucleus	34.33	53.18
KRH53314	Soybean	cytosol, mitochondrion	47.39	48.85
KRH64603	Soybean	cytosol	47.01	48.84
Zm00001d036840_P001	Maize	cytosol	22.76	21.03

Protein Annotations

Gene3D:1.25.40.420	EntrezGene:100282548	Gene3D:3.30.710.10	MapMan:35.1	UniProt:A0A1D6HWW6	InterPro:BTB/POZ_dom
ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	ProteinID:ONM52711.1
PFAM:PF00651	PFscan:PS50097	PANTHER:PTHR24413	PANTHER:PTHR24413:SF131	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225
SUPFAM:SSF54695	UniParc:UPI00084233AB	EnsemblPlantsGene:Zm00001d019328	EnsemblPlants:Zm00001d019328_P003	EnsemblPlants:Zm00001d019328_T003	SEG:seg

Description

BTB/POZ domain-containing protein

Coordinates

chr7:+:28086459..28089520

Molecular Weight (calculated)

30091.6 Da

IEP (calculated)

4.694

GRAVY (calculated)

-0.327

Length

268 amino acids

Sequence
(BLAST)

001: MWCQSCKEGY DEEDAGTCKE CYEEASETEE ELKREIDDLR SRLLFLRLPS PTLDAASAPN CDLLLHAIPS TGAGGERDAG RTPDTPAVPA HRVILVGPLS
101: FTTSSFLCAI LASRSPVFRA MLENEMEESR SGVIKIYDVS YDILRAFVHY MYTAEALLDE QMASDLLVLA EKYEVKHLKA YCEKFIASKV NDDNAITHYA
201: FAHRHSAKQL LEASLSVLMA NMSTLSDREE YKELVEKDPR LVVEIYEAYL NRQVNTAAGK DTNCSNRK

Best Arabidopsis Sequence Match ( AT4G08455.1 )
(BLAST)

001: MRRHHHRCQI GSDSETGSES DSDTDTPMRC ISCREEYLPR NAGTCKECYV EAGETEEELK REIDDLKAKV AFLRLSSSLD HGTSSTSRSF TDVVLIASED
101: NAGSPPIPAH KSVLVSRSPV FKAMLENEME ESLSGTIKIS DVSYDALRTF VYYLYTAEAC LDEQMACDLL VMSEKYQVKH LKSYCERFLV TKLSPDNSLM
201: TYAFAHQHNA KHVLDAALSQ IVENMDKLTK REEYMELVEK DPRLIVEIYE AYLSKQVNTA AGGTSTSKTS

Arabidopsis Description

BTB/POZ domain-containing protein [Source:TAIR;Acc:AT4G08455]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.