Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- plasma membrane 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY34002 | Canola | cytosol | 23.33 | 88.73 |
| CDX83137 | Canola | cytosol | 83.33 | 84.27 |
| CDY34003 | Canola | nucleus | 53.7 | 83.81 |
| VIT_18s0001g01590.t01 | Wine grape | cytosol | 70.0 | 71.59 |
| GSMUA_Achr8P32570_001 | Banana | cytosol | 56.67 | 61.94 |
| Os07t0258700-01 | Rice | cytosol | 55.56 | 60.98 |
| Solyc02g032510.2.1 | Tomato | cytosol | 61.11 | 59.14 |
| TraesCS6A01G046100.1 | Wheat | cytosol | 31.48 | 57.43 |
| OQU88783 | Sorghum | cytosol | 53.33 | 56.25 |
| Zm00001d019328_P003 | Maize | cytosol | 54.07 | 54.48 |
| TraesCS6B01G062000.1 | Wheat | cytosol | 50.37 | 53.75 |
| TraesCS6D01G053100.1 | Wheat | cytosol | 50.0 | 52.53 |
| TraesCS6A01G045900.1 | Wheat | cytosol | 50.0 | 52.53 |
| HORVU6Hr1G009330.1 | Barley | cytosol | 51.11 | 51.88 |
| KRH53314 | Soybean | cytosol, mitochondrion | 47.78 | 49.62 |
| KRH64603 | Soybean | cytosol | 47.41 | 49.61 |
| AT1G01640.1 | Thale cress | cytosol | 20.74 | 27.05 |
| AT2G40450.1 | Thale cress | cytosol | 19.63 | 25.36 |
| AT4G04090.1 | Thale cress | cytosol | 17.41 | 24.48 |
| AT5G48510.1 | Thale cress | cytosol | 19.63 | 23.66 |
| AT2G05330.1 | Thale cress | cytosol | 17.41 | 21.86 |
| AT3G56230.1 | Thale cress | cytosol | 21.11 | 20.21 |
Protein Annotations
| Gene3D:1.25.40.420 | Gene3D:3.30.710.10 | MapMan:35.1 | EntrezGene:826404 | UniProt:A0A178UV67 | UniProt:A0A2H1ZEL9 |
| ProteinID:AEE82644.2 | ArrayExpress:AT4G08455 | EnsemblPlantsGene:AT4G08455 | RefSeq:AT4G08455 | TAIR:AT4G08455 | RefSeq:AT4G08455-TAIR-G |
| EnsemblPlants:AT4G08455.1 | TAIR:AT4G08455.1 | InterPro:BTB/POZ_dom | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006464 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016567 | GO:GO:0019005 |
| GO:GO:0019538 | GO:GO:0030162 | GO:GO:0031625 | GO:GO:0042787 | GO:GO:0043161 | InterPro:IPR000210 |
| RefSeq:NP_680660.3 | ProteinID:OAO96742.1 | PFAM:PF00651 | PO:PO:0000293 | PFscan:PS50097 | PANTHER:PTHR24413 |
| PANTHER:PTHR24413:SF131 | InterPro:SKP1/BTB/POZ_sf | SMART:SM00225 | SUPFAM:SSF54695 | UniParc:UPI00001629F7 | SEG:seg |
Description
BTB/POZ domain-containing protein [Source:TAIR;Acc:AT4G08455]
Coordinates
chr4:+:5375714..5376922
Molecular Weight (calculated)
30353.7 Da
IEP (calculated)
5.003
GRAVY (calculated)
-0.466
Length
270 amino acids
Sequence
(BLAST)
(BLAST)
001: MRRHHHRCQI GSDSETGSES DSDTDTPMRC ISCREEYLPR NAGTCKECYV EAGETEEELK REIDDLKAKV AFLRLSSSLD HGTSSTSRSF TDVVLIASED
101: NAGSPPIPAH KSVLVSRSPV FKAMLENEME ESLSGTIKIS DVSYDALRTF VYYLYTAEAC LDEQMACDLL VMSEKYQVKH LKSYCERFLV TKLSPDNSLM
201: TYAFAHQHNA KHVLDAALSQ IVENMDKLTK REEYMELVEK DPRLIVEIYE AYLSKQVNTA AGGTSTSKTS
101: NAGSPPIPAH KSVLVSRSPV FKAMLENEME ESLSGTIKIS DVSYDALRTF VYYLYTAEAC LDEQMACDLL VMSEKYQVKH LKSYCERFLV TKLSPDNSLM
201: TYAFAHQHNA KHVLDAALSQ IVENMDKLTK REEYMELVEK DPRLIVEIYE AYLSKQVNTA AGGTSTSKTS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.