Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT5G48510.1 | Thale cress | cytosol | 55.81 | 53.57 |
| Bra037082.1-P | Field mustard | cytosol, nucleus, plastid | 38.6 | 52.53 |
| AT2G40450.1 | Thale cress | cytosol | 49.3 | 50.72 |
| CDY08283 | Canola | cytosol | 50.7 | 50.23 |
| AT4G04090.1 | Thale cress | cytosol | 39.53 | 44.27 |
| AT1G01640.1 | Thale cress | cytosol | 31.63 | 32.85 |
| AT3G56230.1 | Thale cress | cytosol | 26.05 | 19.86 |
| GSMUA_Achr5P29570_001 | Banana | cytosol | 23.26 | 17.79 |
| AT4G08455.1 | Thale cress | cytosol | 21.86 | 17.41 |
| HORVU4Hr1G022110.3 | Barley | cytosol | 22.33 | 16.84 |
| TraesCS4A01G196800.2 | Wheat | cytosol | 22.33 | 16.78 |
| EES09114 | Sorghum | cytosol | 21.4 | 16.61 |
| TraesCS4B01G118500.1 | Wheat | cytosol | 21.86 | 16.43 |
| TraesCS4D01G116200.2 | Wheat | cytosol | 21.86 | 16.43 |
| Zm00001d036840_P001 | Maize | cytosol | 21.4 | 15.86 |
| Os12t0111500-02 | Rice | cytosol | 20.0 | 15.64 |
| Os11t0111900-01 | Rice | cytosol | 20.0 | 15.64 |
Protein Annotations
| Gene3D:3.30.710.10 | MapMan:35.1 | EntrezGene:815081 | ProteinID:AAD29070.1 | ProteinID:AEC05917.1 | ProteinID:ANM61206.1 |
| ArrayExpress:AT2G05330 | EnsemblPlantsGene:AT2G05330 | RefSeq:AT2G05330 | TAIR:AT2G05330 | RefSeq:AT2G05330-TAIR-G | EnsemblPlants:AT2G05330.1 |
| TAIR:AT2G05330.1 | Unigene:At.52646 | InterPro:BTB/POZ_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006464 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016567 | GO:GO:0019005 | GO:GO:0019538 |
| GO:GO:0030162 | GO:GO:0031625 | GO:GO:0042787 | GO:GO:0043161 | InterPro:IPR000210 | RefSeq:NP_001323436.1 |
| RefSeq:NP_178602.1 | PFAM:PF00651 | PANTHER:PTHR24413 | PANTHER:PTHR24413:SF164 | UniProt:Q9SJ29 | InterPro:SKP1/BTB/POZ_sf |
| SMART:SM00225 | SUPFAM:SSF54695 | UniParc:UPI000009FE98 | SEG:seg | : | : |
Description
Putative BTB/POZ domain-containing protein At2g05330 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJ29]
Coordinates
chr2:-:1938577..1939470
Molecular Weight (calculated)
24484.4 Da
IEP (calculated)
8.106
GRAVY (calculated)
-0.284
Length
215 amino acids
Sequence
(BLAST)
(BLAST)
001: MATQTNQDHF SGDLRRSWQK IGKLTYGSRQ WIVMMASRSA VLKKMLESDE FKTSAKQVGT ITLLEMKQEE LEAFVEFLYS DGSMLSSKVK QHARALYRAA
101: DKYEILRLRE LCRSELISSL NSTNSLNLLE LAQIPFDKVL NDAALSYIKT NELMFPSFDE FKLFVDNYPN LAVEVMMASL TRTPSTSCSR CGLITYHNQT
201: GTSCCSCGFD YPRRS
101: DKYEILRLRE LCRSELISSL NSTNSLNLLE LAQIPFDKVL NDAALSYIKT NELMFPSFDE FKLFVDNYPN LAVEVMMASL TRTPSTSCSR CGLITYHNQT
201: GTSCCSCGFD YPRRS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.