Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G48510.1 | CDY16196 | AT1G26830.1 | 15772280 |
| AT5G48510.1 | CDY45004 | AT1G26830.1 | 15772280 |
| AT5G48510.1 | CDY46437 | AT1G26830.1 | 15772280 |
| AT5G48510.1 | CDY50732 | AT1G26830.1 | 15772280 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra037082.1-P | Field mustard | cytosol, nucleus, plastid | 60.83 | 83.54 |
| CDX97765 | Canola | cytosol | 35.48 | 65.25 |
| CDY24905 | Canola | cytosol | 62.67 | 65.07 |
| CDY24906 | Canola | cytosol | 39.63 | 64.66 |
| CDY07606 | Canola | cytosol | 61.75 | 64.11 |
| AT5G48510.1 | Thale cress | cytosol | 65.44 | 63.39 |
| CDX79987 | Canola | cytosol | 52.07 | 56.78 |
| CDY23907 | Canola | cytosol | 51.61 | 56.0 |
| CDY31600 | Canola | cytosol | 54.84 | 55.09 |
| CDY07607 | Canola | cytosol | 56.22 | 54.22 |
| CDY23905 | Canola | cytosol | 48.39 | 51.98 |
| CDY24907 | Canola | cytosol | 57.6 | 51.87 |
| CDX79986 | Canola | cytosol | 46.08 | 51.02 |
| AT2G05330.1 | Thale cress | cytosol | 50.23 | 50.7 |
| CDY19060 | Canola | mitochondrion | 39.17 | 49.71 |
| CDY32004 | Canola | cytosol | 34.56 | 37.69 |
| CDX90048 | Canola | cytosol | 35.48 | 36.84 |
| CDY51160 | Canola | cytosol | 31.34 | 33.5 |
| CDY07220 | Canola | cytosol | 30.41 | 32.67 |
| CDX72156 | Canola | cytosol | 31.34 | 24.03 |
| CDY27231 | Canola | cytosol | 31.34 | 24.03 |
| CDY52933 | Canola | cytosol | 31.34 | 23.05 |
| GSMUA_Achr5P29570_001 | Banana | cytosol | 27.65 | 21.35 |
| TraesCS4D01G116200.2 | Wheat | cytosol | 28.11 | 21.33 |
| HORVU4Hr1G022110.3 | Barley | cytosol | 27.65 | 21.05 |
| TraesCS4A01G196800.2 | Wheat | cytosol | 27.65 | 20.98 |
| EES09114 | Sorghum | cytosol | 26.27 | 20.58 |
| TraesCS4B01G118500.1 | Wheat | cytosol | 26.73 | 20.28 |
| Zm00001d036840_P001 | Maize | cytosol | 25.81 | 19.31 |
| Os12t0111500-02 | Rice | cytosol | 23.96 | 18.91 |
| Os11t0111900-01 | Rice | cytosol | 23.5 | 18.55 |
| CDX83137 | Canola | cytosol | 21.2 | 17.23 |
| CDY34003 | Canola | nucleus | 12.9 | 16.18 |
| CDY34002 | Canola | cytosol | 5.07 | 15.49 |
| CDX67639 | Canola | cytosol | 35.94 | 15.2 |
| CDY32006 | Canola | nucleus | 15.21 | 14.29 |
Protein Annotations
| EnsemblPlants:CDY08283 | EnsemblPlantsGene:GSBRNA2T00125615001 | Gene3D:1.25.40.420 | Gene3D:3.30.710.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:BTB/POZ_dom | InterPro:IPR000210 | InterPro:SKP1/BTB/POZ_sf | PANTHER:PTHR24413 | PANTHER:PTHR24413:SF164 |
| PFAM:PF00651 | PFscan:PS50097 | ProteinID:CDY08283 | ProteinID:CDY08283.1 | SMART:SM00225 | SUPFAM:SSF54695 |
| UniParc:UPI0004EE5868 | UniProt:A0A078F950 | MapMan:35.1 | : | : | : |
Description
BnaA05g13360DBnaA05g13360D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F950]
Coordinates
chrLK031984:-:627966..629472
Molecular Weight (calculated)
24521.1 Da
IEP (calculated)
4.728
GRAVY (calculated)
-0.250
Length
217 amino acids
Sequence
(BLAST)
(BLAST)
001: MATQTNQQIF SGGLAKVLEE QWQVDVRLMA GVDNDDDSAI SAHKLILASR SEVFKKMLES DEVKTLAEQV ETVTLSEMKK EELETFVEFM YSDGTMLSPK
101: AKQHVRSLYL AADKYEIPHL RDLCRNEMIS SLDMSNALDF LELAQIPFDN GLNEAAFSYV KNNISTIASS EVFKLFVVSN PNLAWEIMKA SVTKTSNRYN
201: SNFRACRNCG SYCNYCC
101: AKQHVRSLYL AADKYEIPHL RDLCRNEMIS SLDMSNALDF LELAQIPFDN GLNEAAFSYV KNNISTIASS EVFKLFVVSN PNLAWEIMKA SVTKTSNRYN
201: SNFRACRNCG SYCNYCC
001: MATPTNKEHF SGGLAKVLAE KWQVDVMLKA KNSDEGSAIS AHKLILASRS EVFKNMFELD EFKTSTKHVE TITLSEMKHE ELEAFVEFIC SDGSMLSANV
101: KQHARSLYLA ADKYEILHLR DLCRTELISS LSLLNSLDLL VLAQIPFDKV LNDESFSYIK NNISTIASSD EFKLFVAGNP NLAVEIMKVS LITLTLRCSS
201: CGSNHSLQGM YCCNCCRYGT LRLI
101: KQHARSLYLA ADKYEILHLR DLCRTELISS LSLLNSLDLL VLAQIPFDKV LNDESFSYIK NNISTIASSD EFKLFVAGNP NLAVEIMKVS LITLTLRCSS
201: CGSNHSLQGM YCCNCCRYGT LRLI
Arabidopsis Description
BTB/POZ domain-containing protein At5g48510 [Source:UniProtKB/Swiss-Prot;Acc:Q9LV63]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.