Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX79987 | Canola | cytosol | 94.5 | 94.97 |
| CDY24906 | Canola | cytosol | 42.0 | 63.16 |
| CDX97765 | Canola | cytosol | 36.5 | 61.86 |
| CDY24905 | Canola | cytosol | 59.0 | 56.46 |
| CDY07606 | Canola | cytosol | 56.5 | 54.07 |
| CDY08283 | Canola | cytosol | 56.0 | 51.61 |
| CDY31600 | Canola | cytosol | 55.0 | 50.93 |
| CDY23905 | Canola | cytosol | 48.5 | 48.02 |
| CDX79986 | Canola | cytosol | 47.0 | 47.96 |
| CDY19060 | Canola | mitochondrion | 40.5 | 47.37 |
| CDY07607 | Canola | cytosol | 53.0 | 47.11 |
| CDY24907 | Canola | cytosol | 56.0 | 46.47 |
| CDY32004 | Canola | cytosol | 37.0 | 37.19 |
| CDY51160 | Canola | cytosol | 34.5 | 33.99 |
| CDX90048 | Canola | cytosol | 35.0 | 33.49 |
| CDY07220 | Canola | cytosol | 33.5 | 33.17 |
| CDX72156 | Canola | cytosol | 36.0 | 25.44 |
| CDY27231 | Canola | cytosol | 36.0 | 25.44 |
| CDY52933 | Canola | cytosol | 31.5 | 21.36 |
| TraesCS4B01G118500.1 | Wheat | cytosol | 30.5 | 21.33 |
| Os11t0111900-01 | Rice | cytosol | 29.0 | 21.09 |
| Os12t0111500-02 | Rice | cytosol | 29.0 | 21.09 |
| TraesCS4D01G116200.2 | Wheat | cytosol | 30.0 | 20.98 |
| Zm00001d036840_P001 | Maize | cytosol | 30.0 | 20.69 |
| TraesCS4A01G196800.2 | Wheat | cytosol | 29.5 | 20.63 |
| EES09114 | Sorghum | cytosol | 28.5 | 20.58 |
| HORVU4Hr1G022110.3 | Barley | cytosol | 29.0 | 20.35 |
| GSMUA_Achr5P29570_001 | Banana | cytosol | 26.5 | 18.86 |
| CDX83137 | Canola | cytosol | 24.5 | 18.35 |
| CDY32006 | Canola | nucleus | 20.0 | 17.32 |
| CDY34002 | Canola | cytosol | 6.0 | 16.9 |
| CDY34003 | Canola | nucleus | 14.0 | 16.18 |
| CDX67639 | Canola | cytosol | 37.0 | 14.43 |
Protein Annotations
| EnsemblPlants:CDY23907 | EnsemblPlantsGene:GSBRNA2T00024347001 | Gene3D:3.30.710.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:BTB/POZ_dom | InterPro:IPR000210 | InterPro:SKP1/BTB/POZ_sf | PANTHER:PTHR24413 | PANTHER:PTHR24413:SF164 | PFAM:PF00651 |
| PFscan:PS50097 | ProteinID:CDY23907 | ProteinID:CDY23907.1 | SMART:SM00225 | SUPFAM:SSF54695 | UniParc:UPI0004EE09F9 |
| UniProt:A0A078GFJ9 | MapMan:35.1 | : | : | : | : |
Description
BnaC04g01300DBnaC04g01300D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GFJ9]
Coordinates
chrLK032150:+:597440..598180
Molecular Weight (calculated)
22726.4 Da
IEP (calculated)
5.888
GRAVY (calculated)
-0.137
Length
200 amino acids
Sequence
(BLAST)
(BLAST)
001: MTTENNLEIF LGGFAKVFNE QWQVDVRLKA GDSNESAAIS ANKLVLAARS EVFKKMLESD KFKGTADQIE TVTLSELKQE ELEALVGFIY NNRSVLSEKE
101: KKHAQTLFVA ADKYDIPHLR DLCRKELISS LKLANVINIL ELSLIPFDEA LNDAATMFVV RNLLAICDTV EFRLFVGKNP DLTVDIMKSS KSRRWKNYYI
101: KKHAQTLFVA ADKYDIPHLR DLCRKELISS LKLANVINIL ELSLIPFDEA LNDAATMFVV RNLLAICDTV EFRLFVGKNP DLTVDIMKSS KSRRWKNYYI
001: MATQTNQDHF SGDLRRSWQK IGKLTYGSRQ WIVMMASRSA VLKKMLESDE FKTSAKQVGT ITLLEMKQEE LEAFVEFLYS DGSMLSSKVK QHARALYRAA
101: DKYEILRLRE LCRSELISSL NSTNSLNLLE LAQIPFDKVL NDAALSYIKT NELMFPSFDE FKLFVDNYPN LAVEVMMASL TRTPSTSCSR CGLITYHNQT
201: GTSCCSCGFD YPRRS
101: DKYEILRLRE LCRSELISSL NSTNSLNLLE LAQIPFDKVL NDAALSYIKT NELMFPSFDE FKLFVDNYPN LAVEVMMASL TRTPSTSCSR CGLITYHNQT
201: GTSCCSCGFD YPRRS
Arabidopsis Description
Putative BTB/POZ domain-containing protein At2g05330 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJ29]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.