CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY32004	Canola	cytosol	35.09	90.45
Bra003233.1-P	Field mustard	cytosol	67.84	67.84
CDY24906	Canola	cytosol	11.89	45.86
CDY19060	Canola	mitochondrion	13.26	39.77
CDY24905	Canola	cytosol	15.98	39.23
CDX97765	Canola	cytosol	8.97	38.98
CDX79986	Canola	cytosol	14.81	38.78
CDY07606	Canola	cytosol	15.79	38.76
CDY23905	Canola	cytosol	15.01	38.12
CDY23907	Canola	cytosol	14.43	37.0
CDX79987	Canola	cytosol	14.04	36.18
CDY31600	Canola	cytosol	15.2	36.11
CDY08283	Canola	cytosol	15.2	35.94
CDY07607	Canola	cytosol	15.59	35.56
CDY24907	Canola	cytosol	16.37	34.85
CDX72156	Canola	cytosol	19.1	34.63
CDY27231	Canola	cytosol	19.1	34.63
CDX90048	Canola	cytosol	13.84	33.97
CDY32006	Canola	nucleus	15.01	33.33
CDY07220	Canola	cytosol	10.72	27.23
TraesCS4D01G116200.2	Wheat	cytosol	14.62	26.22
TraesCS4A01G196800.2	Wheat	cytosol	14.62	26.22
Os12t0111500-02	Rice	cytosol	14.04	26.18
Os11t0111900-01	Rice	cytosol	14.04	26.18
CDY51160	Canola	cytosol	10.33	26.11
GSMUA_Achr5P29570_001	Banana	cytosol	14.23	25.98
HORVU4Hr1G022110.3	Barley	cytosol	14.43	25.96
TraesCS4B01G118500.1	Wheat	cytosol	14.23	25.52
EES09114	Sorghum	cytosol	13.45	24.91
Zm00001d036840_P001	Maize	cytosol	14.04	24.83
CDY52933	Canola	cytosol	12.28	21.36
CDY34002	Canola	cytosol	2.34	16.9
CDX83137	Canola	cytosol	8.58	16.48
CDY34003	Canola	nucleus	4.68	13.87

Protein Annotations

EnsemblPlants:CDX67639	EnsemblPlantsGene:GSBRNA2T00098798001	Gene3D:3.30.710.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:BTB/POZ_dom	InterPro:IPR000210	InterPro:SKP1/BTB/POZ_sf	PANTHER:PTHR24413	PANTHER:PTHR24413:SF164	PFAM:PF00651
PFscan:PS50097	ProteinID:CDX67639	ProteinID:CDX67639.1	SMART:SM00225	SUPFAM:SSF54695	UniParc:UPI0004EF239B
MapMan:35.1	:	:	:	:	:

Description

BnaA07g16790D

Coordinates

chrLK031787:-:1455345..1458933

Molecular Weight (calculated)

58788.8 Da

IEP (calculated)

6.758

GRAVY (calculated)

-0.267

Length

513 amino acids

Sequence
(BLAST)

001: MPSILRPPRN TICGSCYEGA RTTIALLKKL DGSKEDNGKL TDKSTFNNGS ALSSPLFSLI FKKILDSDEY KTATEYAITL QELKSEELQA LLGGVSIHRH
101: IASDKLEKHV YTLFVAADSK TLKEAALGFV VRNMDVLVFK DIFSRILKKT KAMADQQRNM DLFHDGLAKI FKEQWHPDVL CFAGEDDHED PIPANKVILG
201: ARSDELRELF DGDGKETETI ILYGMNHEAL EVFIEFMYVG NSIQYSEKLK KHARSLYFAA NLYSIPLLRD LCRYQLMSSL NIGNALDILE ISKDDPREKT
301: LHDEARCYVI RHMKEIAFTR EFNWFVKRNT SLTVELIRDM TTQTNLEVFV HGLVKVFKEQ WGVDVWLKPG HNNDGDELIA AHKIILAARS KVFATMFESD
401: KIKNWTVHET ITLSDLKRKE LEVFVEFCYA GECMPSEKLK KHAMSRYCAA DKYEIPYLRD LCRNHIMSSI NASNAVEILE LSRLPFDKTL GEFANNYIDF
501: HSSMIFPLGR FRT

Best Arabidopsis Sequence Match ( AT4G04090.1 )
(BLAST)

001: MGTQTNKGFF YDEFLKVLKE QQVDVRLMAR DSEKDAAISA HKRILSARSE VFEEMFESDK YKASSKLETI TLSEMKHEVL EAFVDFTYSD GSMLSEKAKQ
101: HAMSLYSAAK DYEIPRLWCL CRKELIASLN MSNALRVLQL AQIPYDESLS VAAFTTIKNS KLKLSSSTKV KVFVVNHPNG PLEITRAIFP RN

Arabidopsis Description

Putative BTB/POZ domain-containing protein At4g04090 [Source:UniProtKB/Swiss-Prot;Acc:O81432]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.