CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra004569.1-P	Field mustard	cytosol	99.0	98.01
CDY23907	Canola	cytosol	94.97	94.5
CDY24906	Canola	cytosol	40.7	60.9
CDX97765	Canola	cytosol	35.68	60.17
CDY24905	Canola	cytosol	58.79	55.98
CDY07606	Canola	cytosol	56.28	53.59
CDY08283	Canola	cytosol	56.78	52.07
CDY31600	Canola	cytosol	56.28	51.85
CDY23905	Canola	cytosol	48.24	47.52
CDY19060	Canola	mitochondrion	40.7	47.37
CDX79986	Canola	cytosol	46.23	46.94
CDY07607	Canola	cytosol	52.76	46.67
CDY24907	Canola	cytosol	55.78	46.06
CDY32004	Canola	cytosol	36.18	36.18
CDX90048	Canola	cytosol	35.68	33.97
CDY51160	Canola	cytosol	33.67	33.0
CDY07220	Canola	cytosol	32.66	32.18
CDY27231	Canola	cytosol	35.68	25.09
CDX72156	Canola	cytosol	35.68	25.09
TraesCS4B01G118500.1	Wheat	cytosol	31.66	22.03
Os12t0111500-02	Rice	cytosol	30.15	21.82
Os11t0111900-01	Rice	cytosol	30.15	21.82
TraesCS4D01G116200.2	Wheat	cytosol	31.16	21.68
TraesCS4A01G196800.2	Wheat	cytosol	30.65	21.33
EES09114	Sorghum	cytosol	29.65	21.3
HORVU4Hr1G022110.3	Barley	cytosol	30.15	21.05
Zm00001d036840_P001	Maize	cytosol	30.65	21.03
CDY52933	Canola	cytosol	30.65	20.68
GSMUA_Achr5P29570_001	Banana	cytosol	27.14	19.22
CDX83137	Canola	cytosol	23.62	17.6
CDY32006	Canola	nucleus	19.6	16.88
CDY34003	Canola	nucleus	14.07	16.18
CDY34002	Canola	cytosol	5.53	15.49
CDX67639	Canola	cytosol	36.18	14.04

Protein Annotations

EnsemblPlants:CDX79987	EnsemblPlantsGene:GSBRNA2T00132853001	Gene3D:1.25.40.420	Gene3D:3.30.710.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:BTB/POZ_dom	InterPro:IPR000210	InterPro:SKP1/BTB/POZ_sf	PANTHER:PTHR24413	PANTHER:PTHR24413:SF164
PFAM:PF00651	PFscan:PS50097	ProteinID:CDX79987	ProteinID:CDX79987.1	SMART:SM00225	SUPFAM:SSF54695
UniParc:UPI0004EDF8A5	MapMan:35.1	:	:	:	:

Description

BnaA05g01690D

Coordinates

chrLK031819:+:1179412..1180150

Molecular Weight (calculated)

22738.4 Da

IEP (calculated)

5.724

GRAVY (calculated)

-0.073

Length

199 amino acids

Sequence
(BLAST)

001: MTTENNLEFF LGGFAKVFNE QWQVDVRLKA GDSNENAAIS AHKLAARSEV FKKMLESDKF KGTADQIETV TLSELKQEEL EALVGFIYNN RSVLSEKEKI
101: HAQTLFVAAD KYDIPHLRDL CRKELISSLK LANVINILEL SLIPFDEALN DAAVMFVVRN LLAICDTVEF KLFVVTNPDL TVDIMKSSKS RRWKHYYIF

Best Arabidopsis Sequence Match ( AT2G05330.1 )
(BLAST)

001: MATQTNQDHF SGDLRRSWQK IGKLTYGSRQ WIVMMASRSA VLKKMLESDE FKTSAKQVGT ITLLEMKQEE LEAFVEFLYS DGSMLSSKVK QHARALYRAA
101: DKYEILRLRE LCRSELISSL NSTNSLNLLE LAQIPFDKVL NDAALSYIKT NELMFPSFDE FKLFVDNYPN LAVEVMMASL TRTPSTSCSR CGLITYHNQT
201: GTSCCSCGFD YPRRS

Arabidopsis Description

Putative BTB/POZ domain-containing protein At2g05330 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJ29]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.