Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 2
- mitochondrion 1
- cytosol 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
AT3G56230.1 | Thale cress | cytosol | 69.26 | 56.74 |
Bra007229.1-P | Field mustard | cytosol | 67.53 | 55.12 |
CDY27231 | Canola | cytosol | 67.53 | 55.12 |
CDX72156 | Canola | cytosol | 66.67 | 54.42 |
VIT_13s0067g02290.t01 | Wine grape | cytosol, plastid | 39.83 | 34.07 |
Solyc06g050860.2.1 | Tomato | cytosol | 38.96 | 32.26 |
KRH31216 | Soybean | cytosol, plastid | 35.06 | 30.11 |
KRG97659 | Soybean | cytosol, plastid | 34.2 | 29.37 |
PGSC0003DMT400071906 | Potato | cytosol | 25.54 | 29.35 |
Os11t0111900-01 | Rice | cytosol | 30.3 | 25.45 |
Os12t0111500-02 | Rice | cytosol | 30.3 | 25.45 |
CDX90048 | Canola | cytosol | 22.51 | 24.88 |
EES09114 | Sorghum | cytosol | 29.0 | 24.19 |
TraesCS4B01G118500.1 | Wheat | cytosol | 29.87 | 24.13 |
GSMUA_Achr5P29570_001 | Banana | cytosol | 29.0 | 23.84 |
HORVU4Hr1G022110.3 | Barley | cytosol | 29.0 | 23.51 |
TraesCS4A01G196800.2 | Wheat | cytosol | 29.0 | 23.43 |
PGSC0003DMT400097598 | Potato | cytosol | 19.48 | 23.2 |
TraesCS4D01G116200.2 | Wheat | cytosol | 28.57 | 23.08 |
Solyc05g052290.1.1 | Tomato | cytosol | 25.54 | 22.18 |
Zm00001d036840_P001 | Maize | cytosol | 26.84 | 21.38 |
CDY23907 | Canola | cytosol | 17.32 | 20.0 |
CDY34002 | Canola | cytosol | 6.06 | 19.72 |
CDY51160 | Canola | cytosol | 17.32 | 19.7 |
CDX79987 | Canola | cytosol | 16.88 | 19.6 |
CDY07220 | Canola | cytosol | 16.88 | 19.31 |
CDX97765 | Canola | cytosol | 9.09 | 17.8 |
CDY19060 | Canola | mitochondrion | 12.55 | 16.96 |
CDY31600 | Canola | cytosol | 14.72 | 15.74 |
CDY23905 | Canola | cytosol | 13.42 | 15.35 |
CDY08283 | Canola | cytosol | 14.29 | 15.21 |
CDY07607 | Canola | cytosol | 14.72 | 15.11 |
CDX67639 | Canola | cytosol | 33.33 | 15.01 |
CDY24905 | Canola | cytosol | 12.55 | 13.88 |
CDY07606 | Canola | cytosol | 12.55 | 13.88 |
CDY24907 | Canola | cytosol | 14.29 | 13.69 |
CDY24906 | Canola | cytosol | 7.79 | 13.53 |
CDX79986 | Canola | cytosol | 11.26 | 13.27 |
CDY32004 | Canola | cytosol | 11.26 | 13.07 |
CDX83137 | Canola | cytosol | 12.99 | 11.24 |
CDY34003 | Canola | nucleus | 6.93 | 9.25 |
CDY52933 | Canola | cytosol | 11.69 | 9.15 |
Protein Annotations
EnsemblPlants:CDY32006 | EnsemblPlantsGene:GSBRNA2T00050826001 | Gene3D:1.25.40.420 | GO:A0A078H2H7 | GO:GO:0005575 | GO:GO:0016020 |
GO:GO:0016021 | PANTHER:PTHR24413 | PANTHER:PTHR24413:SF164 | ProteinID:CDY32006 | ProteinID:CDY32006.1 | SEG:seg |
TMHMM:TMhelix | UniParc:UPI0004EF222F | UniProt:A0A078H2H7 | MapMan:35.1 | : | : |
Description
BnaC06g15840DBnaC06g15840D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H2H7]
Coordinates
chrLK032284:-:80987..82237
Molecular Weight (calculated)
26461.0 Da
IEP (calculated)
7.788
GRAVY (calculated)
-0.272
Length
231 amino acids
Sequence
(BLAST)
(BLAST)
001: MDCSICTTKP SILRPPRNTI CGSCYEGART TIALLKKLEG SKEDHEKLTV KSAVNNGSSL SSSPLFSRES QPFEKVIKWM ENMKETEDKQ KKRIVFVSSF
101: VLGFKEGFML IFFYTPAMMD LRSMHIELCW LQNLFKNILD SDKYKTAPEY AITLQELNSE ELQALFVLDV LDVSDLGSSK RLKEAAIGFV VQNMDDIIVL
201: DKYEAFSQKN QHLCVQITRA FLTETRSKRR D
101: VLGFKEGFML IFFYTPAMMD LRSMHIELCW LQNLFKNILD SDKYKTAPEY AITLQELNSE ELQALFVLDV LDVSDLGSSK RLKEAAIGFV VQNMDDIIVL
201: DKYEAFSQKN QHLCVQITRA FLTETRSKRR D
001: MDCSICTTMP SILRPPRNTI CGSCYEGART TIALLKKLEG SKEDRHDKSN HNSTINNGSS ISSSPLFSCE PQPLEKVIKW MKNMKETEEE QKKRIVFLSS
101: FVSGFKEQLH ADILLKPGDD GPPIPAHRAL LASKSEIFKN ILDSDGCKTA PEYAITLQEL NSEQLQALLE FLYTGTLASD KLEKNVYALF IAADKYMIHY
201: LQELCEQYML SSLDISSVLN VLDVSDLGSS KTLKEACVGF VVRNMDDVVF SDKYEPFSQK NQHLCVEITR AFLMETRSKR RD
101: FVSGFKEQLH ADILLKPGDD GPPIPAHRAL LASKSEIFKN ILDSDGCKTA PEYAITLQEL NSEQLQALLE FLYTGTLASD KLEKNVYALF IAADKYMIHY
201: LQELCEQYML SSLDISSVLN VLDVSDLGSS KTLKEACVGF VVRNMDDVVF SDKYEPFSQK NQHLCVEITR AFLMETRSKR RD
Arabidopsis Description
BTB/POZ domain-containing protein At3g56230 [Source:UniProtKB/Swiss-Prot;Acc:Q9LYL9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.