Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- extracellular 2
- golgi 2
- plasma membrane 2
- endoplasmic reticulum 2
- vacuole 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY24906 | Canola | cytosol | 62.71 | 55.64 |
| Bra021691.1-P | Field mustard | cytosol | 89.83 | 52.74 |
| CDY24905 | Canola | cytosol | 66.1 | 37.32 |
| CDY23907 | Canola | cytosol | 61.86 | 36.5 |
| CDY07606 | Canola | cytosol | 64.41 | 36.36 |
| CDX79987 | Canola | cytosol | 60.17 | 35.68 |
| CDY08283 | Canola | cytosol | 65.25 | 35.48 |
| CDY31600 | Canola | cytosol | 60.17 | 32.87 |
| CDX79986 | Canola | cytosol | 52.54 | 31.63 |
| CDY07607 | Canola | cytosol | 60.17 | 31.56 |
| CDY23905 | Canola | cytosol | 53.39 | 31.19 |
| CDY24907 | Canola | cytosol | 60.17 | 29.46 |
| Bra021693.1-P | Field mustard | cytosol | 88.14 | 26.26 |
| CDY19060 | Canola | mitochondrion | 34.75 | 23.98 |
| CDX90048 | Canola | cytosol | 42.37 | 23.92 |
| CDY07220 | Canola | cytosol | 40.68 | 23.76 |
| CDY51160 | Canola | cytosol | 39.83 | 23.15 |
| CDY32004 | Canola | cytosol | 38.98 | 23.12 |
| GSMUA_Achr5P29570_001 | Banana | cytosol | 40.68 | 17.08 |
| CDY27231 | Canola | cytosol | 39.83 | 16.61 |
| CDX72156 | Canola | cytosol | 39.83 | 16.61 |
| CDY34003 | Canola | nucleus | 23.73 | 16.18 |
| CDY52933 | Canola | cytosol | 38.98 | 15.59 |
| Zm00001d036840_P001 | Maize | cytosol | 37.29 | 15.17 |
| EES09114 | Sorghum | cytosol | 35.59 | 15.16 |
| TraesCS4D01G116200.2 | Wheat | cytosol | 36.44 | 15.04 |
| Os11t0111900-01 | Rice | cytosol | 34.75 | 14.91 |
| Os12t0111500-02 | Rice | cytosol | 34.75 | 14.91 |
| TraesCS4A01G196800.2 | Wheat | cytosol | 35.59 | 14.69 |
| HORVU4Hr1G022110.3 | Barley | cytosol | 34.75 | 14.39 |
| TraesCS4B01G118500.1 | Wheat | cytosol | 34.75 | 14.34 |
| CDX83137 | Canola | cytosol | 27.12 | 11.98 |
| CDY32006 | Canola | nucleus | 17.8 | 9.09 |
| CDX67639 | Canola | cytosol | 38.98 | 8.97 |
| CDY34002 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDX97765 | EnsemblPlantsGene:GSBRNA2T00105041001 | Gene3D:3.30.710.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:BTB/POZ_dom | InterPro:IPR000210 | InterPro:SKP1/BTB/POZ_sf | PANTHER:PTHR24413 | PANTHER:PTHR24413:SF164 | PFAM:PF00651 |
| PFscan:PS50097 | ProteinID:CDX97765 | ProteinID:CDX97765.1 | SMART:SM00225 | SUPFAM:SSF54695 | UniParc:UPI0004EDD794 |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaC04g41740D
Coordinates
chrLK031901:+:209720..210753
Molecular Weight (calculated)
13206.8 Da
IEP (calculated)
5.579
GRAVY (calculated)
-0.201
Length
118 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKQSNLNIF LDGFAHILEE QWQVDVLLKA GDSDPDAAIS AHKLVLAARS KVFKKMLEED ECKTSSEKEI ITLSEMKHEE LKALVEFIYS NGSTLCAAGH
101: ARSLYLAADK YEIPHLRT
101: ARSLYLAADK YEIPHLRT
1: MASQTNKELF VGGLARILKE QRQVDVRLKA GDSDQKGVSI SAHKLVLSAR SEVFKMILET EEIKATTTLD TITLSELKHT ELVALVE
Arabidopsis Description
Putative BTB/POZ domain-containing protein At3g29740 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRQ1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.