CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra017002.1-P	Field mustard	cytosol	83.39	86.93
CDY24906	Canola	cytosol	18.98	42.11
CDX97765	Canola	cytosol	15.59	38.98
CDX79986	Canola	cytosol	22.37	33.67
CDY23905	Canola	cytosol	22.03	32.18
CDY23907	Canola	cytosol	21.36	31.5
CDY08283	Canola	cytosol	23.05	31.34
CDX90048	Canola	cytosol	22.03	31.1
CDY31600	Canola	cytosol	22.71	31.02
CDY07607	Canola	cytosol	23.39	30.67
CDY32004	Canola	cytosol	20.68	30.65
CDX79987	Canola	cytosol	20.68	30.65
CDY19060	Canola	mitochondrion	17.63	30.41
CDY07606	Canola	cytosol	20.34	28.71
CDY24905	Canola	cytosol	20.34	28.71
CDY24907	Canola	cytosol	21.69	26.56
CDY07220	Canola	cytosol	17.63	25.74
CDY51160	Canola	cytosol	17.63	25.62
Os12t0111500-02	Rice	cytosol	17.63	18.91
Os11t0111900-01	Rice	cytosol	17.63	18.91
CDY27231	Canola	cytosol	17.97	18.73
CDX72156	Canola	cytosol	17.97	18.73
EES09114	Sorghum	cytosol	17.29	18.41
GSMUA_Achr5P29570_001	Banana	cytosol	17.29	18.15
Zm00001d036840_P001	Maize	cytosol	17.63	17.93
HORVU4Hr1G022110.3	Barley	cytosol	16.61	17.19
TraesCS4B01G118500.1	Wheat	cytosol	16.61	17.13
TraesCS4D01G116200.2	Wheat	cytosol	16.61	17.13
CDY34002	Canola	cytosol	4.07	16.9
CDX83137	Canola	cytosol	15.25	16.85
TraesCS4A01G196800.2	Wheat	cytosol	16.27	16.78
CDY34003	Canola	nucleus	9.83	16.76
CDX67639	Canola	cytosol	21.36	12.28
CDY32006	Canola	nucleus	9.15	11.69

Protein Annotations

EnsemblPlants:CDY52933	EnsemblPlantsGene:GSBRNA2T00008118001	Gene3D:3.30.710.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:BTB/POZ_dom	InterPro:IPR000210	InterPro:SKP1/BTB/POZ_sf	PANTHER:PTHR24413	PANTHER:PTHR24413:SF164	PFAM:PF00651
PFscan:PS50097	ProteinID:CDY52933	ProteinID:CDY52933.1	SEG:seg	SUPFAM:SSF54695	UniParc:UPI0004EE8542
UniProt:A0A078IVB5	MapMan:35.1	:	:	:	:

Description

BnaA04g29400DBnaA04g29400D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IVB5]

Coordinates

chrLK033142:-:70571..74209

Molecular Weight (calculated)

33320.2 Da

IEP (calculated)

7.102

GRAVY (calculated)

-0.209

Length

295 amino acids

Sequence
(BLAST)

001: MSANKKSSPM QTERDAANKM EFDGALMNAT QWQAHVFLKA GDQTDAIAAH KLILMVQHVR VLYLAADKYE IPHLQDLCRN QLSGTRNVFD VLDLAKIHHD
101: NILEHEVSKF IASHMEGVSS SSKFMSFVES DPALTVQAIR GHVARSKVFI RNILESDDFK ASLSKETITL SEMKHDELET FLEFIYNGSL SDTKMMQHVH
201: VLYLAADKYE IPHLQDLCRN QLIGSKNITN FIISHMEGIS FSSKFMSFVE SNPALTVQMI RGHVSLNRLK STTAQLRCCP EARPISCKHE EVGKI

Best Arabidopsis Sequence Match ( AT1G01640.2 )
(BLAST)

001: MHTDVLVKPG EEAPPIPTHK AVLAARSKVF RNMLDSDECK TSPEESITLP DLSHDELKSL LEFLYSGNLK APYNQYRSLY LAADKYDISY LQDVCRNHFI
101: ASLSSRNVLD ILELASIPCD TILKDAAINH IVKHMEEVVV PMKYETFVQR NPDLSVEITR AYLRETKAKA KDHGAPLNGN TRPRIW

Arabidopsis Description

BTB/POZ domain-containing protein At1g01640 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQ95]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.