Factsheet for Os11t0111900-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 2
plasma membrane 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plasma membrane
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0935300-02
Os02t0746000-01
Os05t0193900-00
Os11t0111900-01
Os12t0111500-02

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G01640.1	Os11t0111900-01	AT1G01640.1	21798944
AT1G01640.1	Os12t0111500-02	AT1G01640.1	21798944
AT1G01640.1	Os02t0746000-01	AT1G26830.1	15772280
AT1G01640.1	Os01t0935300-02	AT4G02570.1	15659098
AT1G01640.1	Os05t0193900-00	AT4G02570.1	15659098
AT1G01640.1	Os01t0935300-02	AT4G02570.1	21798944
AT1G01640.1	Os05t0193900-00	AT4G02570.1	21798944
AT5G48510.1	Os02t0746000-01	AT1G26830.1	15772280

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os12t0111500-02	Rice	cytosol	97.09	97.09
EES09114	Sorghum	cytosol	67.27	66.79
Zm00001d036840_P001	Maize	cytosol	69.82	66.21
TraesCS4B01G118500.1	Wheat	cytosol	64.36	61.89
TraesCS4D01G116200.2	Wheat	cytosol	63.64	61.19
TraesCS4A01G196800.2	Wheat	cytosol	63.64	61.19
HORVU4Hr1G022110.3	Barley	cytosol	63.27	61.05
GSMUA_Achr5P29570_001	Banana	cytosol	48.0	46.98
VIT_13s0067g02290.t01	Wine grape	cytosol, plastid	41.82	42.59
PGSC0003DMT400071906	Potato	cytosol	29.82	40.8
CDX90048	Canola	cytosol	30.55	40.19
CDX72156	Canola	cytosol	41.09	39.93
CDY27231	Canola	cytosol	40.73	39.58
Bra007229.1-P	Field mustard	cytosol	40.73	39.58
Solyc06g050860.2.1	Tomato	cytosol	40.0	39.43
KRH31216	Soybean	cytosol, plastid	38.18	39.03
KRG97659	Soybean	cytosol, plastid	37.82	38.66
AT1G01640.1	Thale cress	cytosol	29.09	38.65
AT3G56230.1	Thale cress	cytosol	38.55	37.59
Bra033246.1-P	Field mustard	cytosol	28.0	36.84
PGSC0003DMT400097598	Potato	cytosol	25.82	36.6
CDX97765	Canola	cytosol	14.91	34.75
Solyc05g052290.1.1	Tomato	cytosol	32.0	33.08
Bra037339.1-P	Field mustard	cytosol	22.55	30.54
CDY51160	Canola	cytosol	22.55	30.54
Bra004569.1-P	Field mustard	cytosol	22.18	30.35
CDY32006	Canola	nucleus	25.45	30.3
CDY07220	Canola	cytosol	22.18	30.2
CDX79987	Canola	cytosol	21.82	30.15
CDY24906	Canola	cytosol	14.18	29.32
CDY23907	Canola	cytosol	21.09	29.0
Bra021691.1-P	Field mustard	cytosol	20.36	27.86
Bra000185.1-P	Field mustard	cytosol	20.0	26.57
CDX79986	Canola	cytosol	18.91	26.53
CDY19060	Canola	mitochondrion	16.36	26.32
AT2G40450.1	Thale cress	cytosol	20.0	26.32
CDY23905	Canola	cytosol	19.27	26.24
AT4G04090.1	Thale cress	cytosol	17.82	25.52
CDY31600	Canola	cytosol	19.64	25.0
CDY07607	Canola	cytosol	20.36	24.89
CDY32004	Canola	cytosol	17.82	24.62
Bra004570.1-P	Field mustard	cytosol	18.91	24.53
CDY24905	Canola	cytosol	18.55	24.4
CDY07606	Canola	cytosol	18.55	24.4
Bra000186.1-P	Field mustard	cytosol	18.55	24.4
CDY24907	Canola	cytosol	20.73	23.65
CDY08283	Canola	cytosol	18.55	23.5
Os07t0258700-01	Rice	cytosol	19.27	21.54
AT5G48510.1	Thale cress	cytosol	17.45	21.43
Bra037082.1-P	Field mustard	cytosol, nucleus, plastid	11.64	20.25
Bra017002.1-P	Field mustard	cytosol	20.73	20.14
AT2G05330.1	Thale cress	cytosol	15.64	20.0
CDY52933	Canola	cytosol	18.91	17.63
CDX67639	Canola	cytosol	26.18	14.04
Bra003233.1-P	Field mustard	cytosol	25.82	13.84
Bra021693.1-P	Field mustard	cytosol	19.27	13.38

Protein Annotations

Gene3D:1.25.40.420	Gene3D:3.30.710.10	MapMan:35.1	EntrezGene:4349583	ProteinID:ABA91148.1	EMBL:AK061535
EMBL:AK104218	ProteinID:BAF27409.1	ProteinID:BAT12374.1	InterPro:BTB/POZ_dom	ProteinID:EEE51515.1	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0019005	GO:GO:0019538
GO:GO:0030162	GO:GO:0031625	GO:GO:0043161	InterPro:IPR000210	EnsemblPlantsGene:Os11g0111900	EnsemblPlants:Os11t0111900-01
PFAM:PF00651	PFscan:PS50097	PANTHER:PTHR24413	PANTHER:PTHR24413:SF164	UniProt:Q2RBG8	InterPro:SKP1/BTB/POZ_sf
SMART:SM00225	SUPFAM:SSF54695	UniParc:UPI00006825DF	RefSeq:XP_015615870.1	SEG:seg	:

Description

BTB domain containing protein. (Os11t0111900-01)

Coordinates

chr11:-:558812..560658

Molecular Weight (calculated)

30027.7 Da

IEP (calculated)

5.402

GRAVY (calculated)

-0.179

Length

275 amino acids

Sequence
(BLAST)

001: MDCCVCSPMA SMYRLPRNAI CAACYEGAKA IIAFFNDDDD EHADADQGSV KPSRLTKLNS TIKGLRDAWE EVKQMRCREE ETKQRASFLQ EGFAAAWKDG
101: IHTDIAIRPG TGPPIQAHKA ILATRSEVFR HILAGDDDCK APAGDSLSLP ELTHDELSHL LAFLYTGSLA TCAEERHLHA LLVAGDKYDV PFLRRACEAR
201: LAAGVEAGNV LRTLEVAELS SSAALKERAM GTVVEHAEEV VFSPEYEEFA VRNAALCVQI TRTLLANKSL PAKTP

Best Arabidopsis Sequence Match ( AT3G56230.1 )
(BLAST)

001: MDCSICTTMP SILRPPRNTI CGSCYEGART TIALLKKLEG SKEDRHDKSN HNSTINNGSS ISSSPLFSCE PQPLEKVIKW MKNMKETEEE QKKRIVFLSS
101: FVSGFKEQLH ADILLKPGDD GPPIPAHRAL LASKSEIFKN ILDSDGCKTA PEYAITLQEL NSEQLQALLE FLYTGTLASD KLEKNVYALF IAADKYMIHY
201: LQELCEQYML SSLDISSVLN VLDVSDLGSS KTLKEACVGF VVRNMDDVVF SDKYEPFSQK NQHLCVEITR AFLMETRSKR RD

Arabidopsis Description

BTB/POZ domain-containing protein At3g56230 [Source:UniProtKB/Swiss-Prot;Acc:Q9LYL9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.