Factsheet for Bra004570.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX79986	Canola	cytosol	83.96	90.82
Bra000185.1-P	Field mustard	cytosol	51.42	52.66
Bra021691.1-P	Field mustard	cytosol	48.58	51.24
Bra000186.1-P	Field mustard	cytosol	50.0	50.72
Bra004569.1-P	Field mustard	cytosol	44.81	47.26
Bra037082.1-P	Field mustard	cytosol, nucleus, plastid	34.91	46.84
Bra037339.1-P	Field mustard	cytosol	32.55	33.99
Bra033246.1-P	Field mustard	cytosol	30.66	31.1
Bra017002.1-P	Field mustard	cytosol	33.96	25.44
Bra021693.1-P	Field mustard	cytosol	46.7	25.0
Bra007229.1-P	Field mustard	cytosol	31.6	23.67
GSMUA_Achr5P29570_001	Banana	cytosol	27.83	21.0
Zm00001d036840_P001	Maize	cytosol	28.3	20.69
TraesCS4D01G116200.2	Wheat	cytosol	26.89	19.93
TraesCS4A01G196800.2	Wheat	cytosol	26.42	19.58
EES09114	Sorghum	cytosol	25.47	19.49
HORVU4Hr1G022110.3	Barley	cytosol	25.94	19.3
Os12t0111500-02	Rice	cytosol	25.0	19.27
TraesCS4B01G118500.1	Wheat	cytosol	25.94	19.23
Os11t0111900-01	Rice	cytosol	24.53	18.91
Bra003233.1-P	Field mustard	cytosol	34.43	14.23

Protein Annotations

EnsemblPlants:Bra004570.1	EnsemblPlants:Bra004570.1-P	EnsemblPlantsGene:Bra004570	Gene3D:1.25.40.420	Gene3D:3.30.710.10	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:BTB/POZ_dom	InterPro:IPR000210	InterPro:SKP1/BTB/POZ_sf	PANTHER:PTHR24413
PANTHER:PTHR24413:SF164	PFAM:PF00651	PFscan:PS50097	SEG:seg	SMART:SM00225	SUPFAM:SSF54695
UniParc:UPI00025474C8	UniProt:M4CK36	MapMan:35.1	:	:	:

Description

AT2G40450 (E=5e-051) | speckle-type POZ protein-related

Coordinates

chrA05:-:834971..835702

Molecular Weight (calculated)

23906.3 Da

IEP (calculated)

9.717

GRAVY (calculated)

-0.059

Length

212 amino acids

Sequence
(BLAST)

001: MATDVSSSGF AKILKQKWHT DLLLKAGDSN GFAAISAHKL VNAARSEVFK KMLESKATKA SSDQTLFFSE MRHEELETLV KFMYNDHGLV SSSKLKKHVR
101: SLYLAAQRYE IPHLRDLCRN ELISSLSSSN ALDELSQVPL DKPLTDAVLS FIARNINTFL DSCEFKMFVA RNPNLAVEIT KAFLNPVMIP SQSNMSLMMI
201: MMMMMTMTTK IR

Best Arabidopsis Sequence Match ( AT2G40450.1 )
(BLAST)

001: MATQSNKEAF LGGFKKLLNE QWQADVRLKA GDSDETTSIF AHKLVLVARS EVFKKILESD EFKASSKQME TVTLSEMKHE ELEAFVEFIY RVDGSICSAS
101: LKKHARSLFH AADKYEIPHL RDLCRNELIS SLNSSNALSI LELAQIPFDK ALNDPAFTTI ITNISTIASG DEFKLFVANH PNLAVDIMKA SITRLSTSRK
201: ICGYCNRYY

Arabidopsis Description

Putative BTB/POZ domain-containing protein At2g40450 [Source:UniProtKB/Swiss-Prot;Acc:O22890]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.