Factsheet for Bra003233.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 4
cytosol 2
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY32004	Canola	cytosol	35.09	90.45
CDX67639	Canola	cytosol	67.84	67.84
Bra000185.1-P	Field mustard	cytosol	16.18	40.1
Bra000186.1-P	Field mustard	cytosol	16.18	39.71
Bra004569.1-P	Field mustard	cytosol	14.43	36.82
Bra037082.1-P	Field mustard	cytosol, nucleus, plastid	11.31	36.71
Bra021691.1-P	Field mustard	cytosol	14.04	35.82
Bra004570.1-P	Field mustard	cytosol	14.23	34.43
Bra007229.1-P	Field mustard	cytosol	18.91	34.28
Bra033246.1-P	Field mustard	cytosol	12.28	30.14
Zm00001d036840_P001	Maize	cytosol	14.81	26.21
Os12t0111500-02	Rice	cytosol	14.04	26.18
TraesCS4D01G116200.2	Wheat	cytosol	14.43	25.87
Os11t0111900-01	Rice	cytosol	13.84	25.82
GSMUA_Achr5P29570_001	Banana	cytosol	14.04	25.62
TraesCS4A01G196800.2	Wheat	cytosol	14.23	25.52
HORVU4Hr1G022110.3	Barley	cytosol	14.04	25.26
Bra037339.1-P	Field mustard	cytosol	9.94	25.12
TraesCS4B01G118500.1	Wheat	cytosol	13.84	24.83
EES09114	Sorghum	cytosol	13.26	24.55
Bra017002.1-P	Field mustard	cytosol	12.67	22.97
Bra021693.1-P	Field mustard	cytosol	13.84	17.93

Protein Annotations

EnsemblPlants:Bra003233.1	EnsemblPlants:Bra003233.1-P	EnsemblPlantsGene:Bra003233	Gene3D:3.30.710.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:BTB/POZ_dom	InterPro:IPR000210	InterPro:SKP1/BTB/POZ_sf	PANTHER:PTHR24413	PANTHER:PTHR24413:SF164
PFAM:PF00651	PFscan:PS50097	SMART:SM00225	SUPFAM:SSF54695	UniParc:UPI00025414C6	UniProt:M4CGA0
MapMan:35.1	:	:	:	:	:

Description

AT5G48510 (E=3e-038) | speckle-type POZ protein-related

Coordinates

chrA07:-:12055711..12059250

Molecular Weight (calculated)

58662.8 Da

IEP (calculated)

6.560

GRAVY (calculated)

-0.235

Length

513 amino acids

Sequence
(BLAST)

001: MPSILRPPRN TICGSCYEGA RTTIALLKKL DGSKEDNGKL TDKSTFNNGS ALSSPLFSLI FKKILDSDEY KTATEYAITL QELKSEELQA LLGGVSIHRH
101: IASDKLEKHV YTLFVAADSK TLKEAALGFV VRNMDVLVFK DIFSRILKKT KAMADQQRNM DLFHDGLAKI FKEQWHPDVL CLAGEDDHED PIPANKVILG
201: ARSDELRELF DGDGKEIETV ILYGMNHEAL EVFIEFMYVG NSIQYSEKLK KHARSLYFAA NLYSIPLLRD LCRCQLMSSL NIGNALDILE ISKDDPREKT
301: LHDEARCYVI RHMKEIAFTR EFNLFVKRNT SLTVELIRDM TTQTNLEVFA HGLVKVFKEQ WGVDVWLKPG HNNDGDELIA AHKIILAARS KVFATMFESD
401: KIKNWTVHET ITLSDLKREE LEVFVEFCYA GECMPSEKLK KHAMSLYRAA EKYEIPYLRD LCRNHIMSSI NASNAVEILE LSRLPFDKTL CEFANNYIDF
501: HSSMIFPLGR FRT

Best Arabidopsis Sequence Match ( AT4G04090.1 )
(BLAST)

001: MGTQTNKGFF YDEFLKVLKE QQVDVRLMAR DSEKDAAISA HKRILSARSE VFEEMFESDK YKASSKLETI TLSEMKHEVL EAFVDFTYSD GSMLSEKAKQ
101: HAMSLYSAAK DYEIPRLWCL CRKELIASLN MSNALRVLQL AQIPYDESLS VAAFTTIKNS KLKLSSSTKV KVFVVNHPNG PLEITRAIFP RN

Arabidopsis Description

Putative BTB/POZ domain-containing protein At4g04090 [Source:UniProtKB/Swiss-Prot;Acc:O81432]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.