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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • plasma membrane 3
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • golgi 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX97765 Canola cytosol 52.74 89.83
Bra000185.1-P Field mustard cytosol 60.2 58.45
Bra000186.1-P Field mustard cytosol 60.7 58.37
Bra004569.1-P Field mustard cytosol 54.23 54.23
Bra037082.1-P Field mustard cytosol, nucleus, plastid 41.79 53.16
Bra004570.1-P Field mustard cytosol 51.24 48.58
Bra021693.1-P Field mustard cytosol 83.08 42.17
Bra037339.1-P Field mustard cytosol 37.31 36.95
Bra033246.1-P Field mustard cytosol 36.32 34.93
Bra017002.1-P Field mustard cytosol 37.81 26.86
Bra007229.1-P Field mustard cytosol 34.33 24.38
GSMUA_Achr5P29570_001 Banana cytosol 33.83 24.2
EES09114 Sorghum cytosol 30.85 22.38
Zm00001d036840_P001 Maize cytosol 30.85 21.38
TraesCS4A01G196800.2 Wheat cytosol 29.85 20.98
TraesCS4D01G116200.2 Wheat cytosol 29.85 20.98
Os12t0111500-02 Rice cytosol 28.36 20.73
HORVU4Hr1G022110.3 Barley cytosol 29.35 20.7
Os11t0111900-01 Rice cytosol 27.86 20.36
TraesCS4B01G118500.1 Wheat cytosol 28.86 20.28
Bra003233.1-P Field mustard cytosol 35.82 14.04
Protein Annotations
EnsemblPlants:Bra021691.1EnsemblPlants:Bra021691.1-PEnsemblPlantsGene:Bra021691Gene3D:1.25.40.420Gene3D:3.30.710.10GO:GO:0003674
GO:GO:0005488GO:GO:0005515InterPro:BTB/POZ_domInterPro:IPR000210InterPro:SKP1/BTB/POZ_sfPANTHER:PTHR24413
PANTHER:PTHR24413:SF164PFAM:PF00651PFscan:PS50097SMART:SM00225SUPFAM:SSF54695UniParc:UPI00025449AC
UniProt:M4DYU5MapMan:35.1::::
Description
AT2G40450 (E=2e-059) | speckle-type POZ protein-related
Coordinates
chrA04:-:13876067..13876917
Molecular Weight (calculated)
22575.0 Da
IEP (calculated)
4.581
GRAVY (calculated)
-0.096
Length
201 amino acids
Sequence
(BLAST)
001: MAKQSNLNIF LDVFAHILEE QWQVDVLLKA GDSDPDAAIS AHKLVLAARS KVFKKMLEED ECKTSSEKEI ITLSEMKHEE LKALVEFIYS DGSTPCAGHA
101: RSLYLAADKY EIPHLRDLTR NELISSLNAS NALDVYELAQ IPFDDALNNA ALSCIRMNIA TIAYSDELKL FAESNPNLTV EIMKACVEQS RIRNYTFCIL
201: E
Best Arabidopsis Sequence Match ( AT2G40450.1 )
(BLAST)
001: MATQSNKEAF LGGFKKLLNE QWQADVRLKA GDSDETTSIF AHKLVLVARS EVFKKILESD EFKASSKQME TVTLSEMKHE ELEAFVEFIY RVDGSICSAS
101: LKKHARSLFH AADKYEIPHL RDLCRNELIS SLNSSNALSI LELAQIPFDK ALNDPAFTTI ITNISTIASG DEFKLFVANH PNLAVDIMKA SITRLSTSRK
201: ICGYCNRYY
Arabidopsis Description
Putative BTB/POZ domain-containing protein At2g40450 [Source:UniProtKB/Swiss-Prot;Acc:O22890]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.