Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- plasma membrane 3
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- golgi 2
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDX97765 | Canola | cytosol | 52.74 | 89.83 |
Bra000185.1-P | Field mustard | cytosol | 60.2 | 58.45 |
Bra000186.1-P | Field mustard | cytosol | 60.7 | 58.37 |
Bra004569.1-P | Field mustard | cytosol | 54.23 | 54.23 |
Bra037082.1-P | Field mustard | cytosol, nucleus, plastid | 41.79 | 53.16 |
Bra004570.1-P | Field mustard | cytosol | 51.24 | 48.58 |
Bra021693.1-P | Field mustard | cytosol | 83.08 | 42.17 |
Bra037339.1-P | Field mustard | cytosol | 37.31 | 36.95 |
Bra033246.1-P | Field mustard | cytosol | 36.32 | 34.93 |
Bra017002.1-P | Field mustard | cytosol | 37.81 | 26.86 |
Bra007229.1-P | Field mustard | cytosol | 34.33 | 24.38 |
GSMUA_Achr5P29570_001 | Banana | cytosol | 33.83 | 24.2 |
EES09114 | Sorghum | cytosol | 30.85 | 22.38 |
Zm00001d036840_P001 | Maize | cytosol | 30.85 | 21.38 |
TraesCS4A01G196800.2 | Wheat | cytosol | 29.85 | 20.98 |
TraesCS4D01G116200.2 | Wheat | cytosol | 29.85 | 20.98 |
Os12t0111500-02 | Rice | cytosol | 28.36 | 20.73 |
HORVU4Hr1G022110.3 | Barley | cytosol | 29.35 | 20.7 |
Os11t0111900-01 | Rice | cytosol | 27.86 | 20.36 |
TraesCS4B01G118500.1 | Wheat | cytosol | 28.86 | 20.28 |
Bra003233.1-P | Field mustard | cytosol | 35.82 | 14.04 |
Protein Annotations
EnsemblPlants:Bra021691.1 | EnsemblPlants:Bra021691.1-P | EnsemblPlantsGene:Bra021691 | Gene3D:1.25.40.420 | Gene3D:3.30.710.10 | GO:GO:0003674 |
GO:GO:0005488 | GO:GO:0005515 | InterPro:BTB/POZ_dom | InterPro:IPR000210 | InterPro:SKP1/BTB/POZ_sf | PANTHER:PTHR24413 |
PANTHER:PTHR24413:SF164 | PFAM:PF00651 | PFscan:PS50097 | SMART:SM00225 | SUPFAM:SSF54695 | UniParc:UPI00025449AC |
UniProt:M4DYU5 | MapMan:35.1 | : | : | : | : |
Description
AT2G40450 (E=2e-059) | speckle-type POZ protein-related
Coordinates
chrA04:-:13876067..13876917
Molecular Weight (calculated)
22575.0 Da
IEP (calculated)
4.581
GRAVY (calculated)
-0.096
Length
201 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKQSNLNIF LDVFAHILEE QWQVDVLLKA GDSDPDAAIS AHKLVLAARS KVFKKMLEED ECKTSSEKEI ITLSEMKHEE LKALVEFIYS DGSTPCAGHA
101: RSLYLAADKY EIPHLRDLTR NELISSLNAS NALDVYELAQ IPFDDALNNA ALSCIRMNIA TIAYSDELKL FAESNPNLTV EIMKACVEQS RIRNYTFCIL
201: E
101: RSLYLAADKY EIPHLRDLTR NELISSLNAS NALDVYELAQ IPFDDALNNA ALSCIRMNIA TIAYSDELKL FAESNPNLTV EIMKACVEQS RIRNYTFCIL
201: E
001: MATQSNKEAF LGGFKKLLNE QWQADVRLKA GDSDETTSIF AHKLVLVARS EVFKKILESD EFKASSKQME TVTLSEMKHE ELEAFVEFIY RVDGSICSAS
101: LKKHARSLFH AADKYEIPHL RDLCRNELIS SLNSSNALSI LELAQIPFDK ALNDPAFTTI ITNISTIASG DEFKLFVANH PNLAVDIMKA SITRLSTSRK
201: ICGYCNRYY
101: LKKHARSLFH AADKYEIPHL RDLCRNELIS SLNSSNALSI LELAQIPFDK ALNDPAFTTI ITNISTIASG DEFKLFVANH PNLAVDIMKA SITRLSTSRK
201: ICGYCNRYY
Arabidopsis Description
Putative BTB/POZ domain-containing protein At2g40450 [Source:UniProtKB/Swiss-Prot;Acc:O22890]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.