Factsheet for Bra000186.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY07606	Canola	cytosol	100.0	100.0
Bra000185.1-P	Field mustard	cytosol	76.08	76.81
AT2G40450.1	Thale cress	cytosol	69.86	69.86
Bra021691.1-P	Field mustard	cytosol	58.37	60.7
Bra037082.1-P	Field mustard	cytosol, nucleus, plastid	44.98	59.49
Bra004569.1-P	Field mustard	cytosol	54.55	56.72
Bra004570.1-P	Field mustard	cytosol	50.72	50.0
Bra037339.1-P	Field mustard	cytosol	33.01	33.99
Bra033246.1-P	Field mustard	cytosol	33.49	33.49
Bra021693.1-P	Field mustard	cytosol	54.55	28.79
Bra017002.1-P	Field mustard	cytosol	32.54	24.03
GSMUA_Achr5P29570_001	Banana	cytosol	32.06	23.84
Bra007229.1-P	Field mustard	cytosol	31.1	22.97
TraesCS4D01G116200.2	Wheat	cytosol	28.23	20.63
TraesCS4A01G196800.2	Wheat	cytosol	27.75	20.28
Zm00001d036840_P001	Maize	cytosol	27.75	20.0
EES09114	Sorghum	cytosol	26.32	19.86
HORVU4Hr1G022110.3	Barley	cytosol	26.79	19.65
TraesCS4B01G118500.1	Wheat	cytosol	26.79	19.58
Os11t0111900-01	Rice	cytosol	24.4	18.55
Os12t0111500-02	Rice	cytosol	24.4	18.55
Bra003233.1-P	Field mustard	cytosol	39.71	16.18

Protein Annotations

Gene3D:1.25.40.420	Gene3D:3.30.710.10	MapMan:35.1	InterPro:BTB/POZ_dom	EnsemblPlantsGene:Bra000186	EnsemblPlants:Bra000186.1
EnsemblPlants:Bra000186.1-P	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	UniProt:M4C7K8
PFAM:PF00651	PFscan:PS50097	PANTHER:PTHR24413	PANTHER:PTHR24413:SF164	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225
SUPFAM:SSF54695	UniParc:UPI00025402D1	SEG:seg	:	:	:

Description

AT2G40450 (E=4e-071) | speckle-type POZ protein-related

Coordinates

chrA03:-:9779253..9779958

Molecular Weight (calculated)

23480.5 Da

IEP (calculated)

7.985

GRAVY (calculated)

-0.095

Length

209 amino acids

Sequence
(BLAST)

001: MARQGNKEIF LGGLRKLFEE QWQVDVLLKA GNSDECASIS AHKLVLASRS MVLKKMMESD ELKSSPKLET VTFSEMRQEE LEALVEFMYS VDGSISSQSL
101: KKHVRSLYLA ADKYEIPHLR DLCRMHLISS LNSSNALKIL ELAQIPFDKA LNDAAFITIK NNISSIASSA EFKLFVVNHP DLSVEIMKAS LIRPRTAASC
201: HYCGSSFRY

Best Arabidopsis Sequence Match ( AT2G40450.1 )
(BLAST)

001: MATQSNKEAF LGGFKKLLNE QWQADVRLKA GDSDETTSIF AHKLVLVARS EVFKKILESD EFKASSKQME TVTLSEMKHE ELEAFVEFIY RVDGSICSAS
101: LKKHARSLFH AADKYEIPHL RDLCRNELIS SLNSSNALSI LELAQIPFDK ALNDPAFTTI ITNISTIASG DEFKLFVANH PNLAVDIMKA SITRLSTSRK
201: ICGYCNRYY

Arabidopsis Description

Putative BTB/POZ domain-containing protein At2g40450 [Source:UniProtKB/Swiss-Prot;Acc:O22890]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.