Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY24906 | Canola | cytosol | 47.37 | 74.44 |
| CDY24905 | Canola | cytosol | 70.81 | 70.81 |
| Bra000186.1-P | Field mustard | cytosol | 69.86 | 69.86 |
| CDY07606 | Canola | cytosol | 69.86 | 69.86 |
| Bra000185.1-P | Field mustard | cytosol | 66.99 | 67.63 |
| CDY07607 | Canola | cytosol | 66.03 | 61.33 |
| AT5G48510.1 | Thale cress | cytosol | 65.07 | 60.71 |
| CDY24907 | Canola | cytosol | 68.42 | 59.34 |
| AT4G04090.1 | Thale cress | cytosol | 50.24 | 54.69 |
| AT2G05330.1 | Thale cress | cytosol | 50.72 | 49.3 |
| AT1G01640.1 | Thale cress | cytosol | 37.32 | 37.68 |
| AT3G56230.1 | Thale cress | cytosol | 31.1 | 23.05 |
| GSMUA_Achr5P29570_001 | Banana | cytosol | 30.62 | 22.78 |
| TraesCS4A01G196800.2 | Wheat | cytosol | 29.67 | 21.68 |
| HORVU4Hr1G022110.3 | Barley | cytosol | 29.19 | 21.4 |
| TraesCS4B01G118500.1 | Wheat | cytosol | 29.19 | 21.33 |
| TraesCS4D01G116200.2 | Wheat | cytosol | 29.19 | 21.33 |
| EES09114 | Sorghum | cytosol | 28.23 | 21.3 |
| Zm00001d036840_P001 | Maize | cytosol | 28.71 | 20.69 |
| Os11t0111900-01 | Rice | cytosol | 26.32 | 20.0 |
| Os12t0111500-02 | Rice | cytosol | 26.32 | 20.0 |
| AT4G08455.1 | Thale cress | cytosol | 25.36 | 19.63 |
Protein Annotations
| Gene3D:1.25.40.420 | Gene3D:3.30.710.10 | MapMan:35.1 | EntrezGene:818639 | UniProt:A0A178VQV3 | ProteinID:AAB87591.1 |
| ProteinID:AEC09832.1 | ArrayExpress:AT2G40450 | EnsemblPlantsGene:AT2G40450 | RefSeq:AT2G40450 | TAIR:AT2G40450 | RefSeq:AT2G40450-TAIR-G |
| EnsemblPlants:AT2G40450.1 | TAIR:AT2G40450.1 | InterPro:BTB/POZ_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006464 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016567 | GO:GO:0019005 | GO:GO:0019538 |
| GO:GO:0030162 | GO:GO:0031625 | GO:GO:0042787 | GO:GO:0043161 | InterPro:IPR000210 | RefSeq:NP_181577.1 |
| UniProt:O22890 | ProteinID:OAP08709.1 | PFAM:PF00651 | PFscan:PS50097 | PANTHER:PTHR24413 | PANTHER:PTHR24413:SF164 |
| InterPro:SKP1/BTB/POZ_sf | SMART:SM00225 | SUPFAM:SSF54695 | UniParc:UPI00000A9F88 | SEG:seg | : |
Description
Putative BTB/POZ domain-containing protein At2g40450 [Source:UniProtKB/Swiss-Prot;Acc:O22890]
Coordinates
chr2:-:16892024..16892974
Molecular Weight (calculated)
23505.1 Da
IEP (calculated)
7.113
GRAVY (calculated)
-0.184
Length
209 amino acids
Sequence
(BLAST)
(BLAST)
001: MATQSNKEAF LGGFKKLLNE QWQADVRLKA GDSDETTSIF AHKLVLVARS EVFKKILESD EFKASSKQME TVTLSEMKHE ELEAFVEFIY RVDGSICSAS
101: LKKHARSLFH AADKYEIPHL RDLCRNELIS SLNSSNALSI LELAQIPFDK ALNDPAFTTI ITNISTIASG DEFKLFVANH PNLAVDIMKA SITRLSTSRK
201: ICGYCNRYY
101: LKKHARSLFH AADKYEIPHL RDLCRNELIS SLNSSNALSI LELAQIPFDK ALNDPAFTTI ITNISTIASG DEFKLFVANH PNLAVDIMKA SITRLSTSRK
201: ICGYCNRYY
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.