Factsheet for Bra000185.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
plasma membrane 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY07607	Canola	cytosol	90.34	83.11
Bra000186.1-P	Field mustard	cytosol	76.81	76.08
AT2G40450.1	Thale cress	cytosol	67.63	66.99
Bra021691.1-P	Field mustard	cytosol	58.45	60.2
Bra037082.1-P	Field mustard	cytosol, nucleus, plastid	42.51	55.7
Bra004569.1-P	Field mustard	cytosol	53.62	55.22
Bra004570.1-P	Field mustard	cytosol	52.66	51.42
Bra037339.1-P	Field mustard	cytosol	31.88	32.51
Bra033246.1-P	Field mustard	cytosol	30.92	30.62
Bra021693.1-P	Field mustard	cytosol	54.59	28.54
Bra017002.1-P	Field mustard	cytosol	35.75	26.15
Bra007229.1-P	Field mustard	cytosol	32.37	23.67
GSMUA_Achr5P29570_001	Banana	cytosol	31.88	23.49
TraesCS4D01G116200.2	Wheat	cytosol	29.95	21.68
TraesCS4A01G196800.2	Wheat	cytosol	29.47	21.33
HORVU4Hr1G022110.3	Barley	cytosol	28.5	20.7
TraesCS4B01G118500.1	Wheat	cytosol	28.5	20.63
EES09114	Sorghum	cytosol	27.05	20.22
Os11t0111900-01	Rice	cytosol	26.57	20.0
Os12t0111500-02	Rice	cytosol	26.57	20.0
Zm00001d036840_P001	Maize	cytosol	26.57	18.97
Bra003233.1-P	Field mustard	cytosol	40.1	16.18

Protein Annotations

EnsemblPlants:Bra000185.1	EnsemblPlants:Bra000185.1-P	EnsemblPlantsGene:Bra000185	Gene3D:1.25.40.420	Gene3D:3.30.710.10	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:BTB/POZ_dom	InterPro:IPR000210	InterPro:SKP1/BTB/POZ_sf	PANTHER:PTHR24413
PANTHER:PTHR24413:SF164	PFAM:PF00651	PFscan:PS50097	SEG:seg	SMART:SM00225	SUPFAM:SSF54695
UniParc:UPI00025402D0	UniProt:M4C7K7	MapMan:35.1	:	:	:

Description

AT2G40450 (E=3e-061) | speckle-type POZ protein-related

Coordinates

chrA03:-:9777761..9778641

Molecular Weight (calculated)

23267.1 Da

IEP (calculated)

7.338

GRAVY (calculated)

-0.109

Length

207 amino acids

Sequence
(BLAST)

001: MVTQNNKEIF LSGLKKLFEE QWQPDVLLKA GNSDKGATIS AHKLVLASRS VVLKKIMESD EFKASSKLET VTFSEMKHEE LEALVEFMYC VDGSICLESL
101: KKHVGSLYLA ADKYEIPHLR DLCRNQLKSS LNSSNALNTF ELAQIPFDKA LNDAAFTTIK NNINTIANSA EFKLFVVNNP YLSVEIMKAF LVQPNSYCCG
201: CCGKYRF

Best Arabidopsis Sequence Match ( AT2G40450.1 )
(BLAST)

001: MATQSNKEAF LGGFKKLLNE QWQADVRLKA GDSDETTSIF AHKLVLVARS EVFKKILESD EFKASSKQME TVTLSEMKHE ELEAFVEFIY RVDGSICSAS
101: LKKHARSLFH AADKYEIPHL RDLCRNELIS SLNSSNALSI LELAQIPFDK ALNDPAFTTI ITNISTIASG DEFKLFVANH PNLAVDIMKA SITRLSTSRK
201: ICGYCNRYY

Arabidopsis Description

Putative BTB/POZ domain-containing protein At2g40450 [Source:UniProtKB/Swiss-Prot;Acc:O22890]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.