CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra000185.1-P	Field mustard	cytosol	83.11	90.34
CDY24906	Canola	cytosol	50.67	85.71
CDY24907	Canola	cytosol	82.67	77.18
CDY24905	Canola	cytosol	71.56	77.03
CDY07606	Canola	cytosol	69.78	75.12
AT2G40450.1	Thale cress	cytosol	61.33	66.03
CDX97765	Canola	cytosol	31.56	60.17
CDY08283	Canola	cytosol	54.22	56.22
CDY23905	Canola	cytosol	48.44	53.96
CDX79986	Canola	cytosol	46.22	53.06
CDY23907	Canola	cytosol	47.11	53.0
CDY31600	Canola	cytosol	50.67	52.78
CDX79987	Canola	cytosol	46.67	52.76
CDY19060	Canola	mitochondrion	38.22	50.29
CDY32004	Canola	cytosol	35.11	39.7
CDX90048	Canola	cytosol	32.89	35.41
CDY07220	Canola	cytosol	29.33	32.67
CDY51160	Canola	cytosol	28.44	31.53
CDY27231	Canola	cytosol	31.11	24.73
CDX72156	Canola	cytosol	31.11	24.73
CDY34002	Canola	cytosol	7.56	23.94
GSMUA_Achr5P29570_001	Banana	cytosol	29.78	23.84
CDY52933	Canola	cytosol	30.67	23.39
TraesCS4D01G116200.2	Wheat	cytosol	28.0	22.03
TraesCS4A01G196800.2	Wheat	cytosol	27.56	21.68
EES09114	Sorghum	cytosol	26.67	21.66
TraesCS4B01G118500.1	Wheat	cytosol	27.11	21.33
HORVU4Hr1G022110.3	Barley	cytosol	26.67	21.05
Os11t0111900-01	Rice	cytosol	24.89	20.36
Os12t0111500-02	Rice	cytosol	24.89	20.36
Zm00001d036840_P001	Maize	cytosol	25.78	20.0
CDX83137	Canola	cytosol	23.56	19.85
CDX67639	Canola	cytosol	35.56	15.59
CDY34003	Canola	nucleus	11.56	15.03
CDY32006	Canola	nucleus	15.11	14.72

Protein Annotations

EnsemblPlants:CDY07607	EnsemblPlantsGene:GSBRNA2T00124704001	Gene3D:1.25.40.420	Gene3D:3.30.710.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:BTB/POZ_dom	InterPro:IPR000210	InterPro:SKP1/BTB/POZ_sf	PANTHER:PTHR24413	PANTHER:PTHR24413:SF164
PFAM:PF00651	PFscan:PS50097	ProteinID:CDY07607	ProteinID:CDY07607.1	SEG:seg	SMART:SM00225
SUPFAM:SSF54695	UniParc:UPI0004EE3489	UniProt:A0A078F3G2	MapMan:35.1	:	:

Description

BnaA03g19040DBnaA03g19040D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F3G2]

Coordinates

chrLK031980:+:45069..46003

Molecular Weight (calculated)

25262.5 Da

IEP (calculated)

7.697

GRAVY (calculated)

-0.127

Length

225 amino acids

Sequence
(BLAST)

001: MNLYLSKLQS GFGVCNGNTE QQRLKEIFLS GLKKLFEEQW QPDVLLKAGN SDKGATISAH KLVLASRSVV LKKIMESDEF KASSKLETVT FSEMKHEELE
101: ALVEFMYCVD GSICLESLKK HVGSLYLAAD KYEIPHLRDL CRNQLKSSLN SSNALNTFEL AQIPFDKALN DAAFTTIKNN INTIANSAEF KLFVVNNPYL
201: SVEIMKAFLV QPNSYCCGCC GKYRF

Best Arabidopsis Sequence Match ( AT2G40450.1 )
(BLAST)

001: MATQSNKEAF LGGFKKLLNE QWQADVRLKA GDSDETTSIF AHKLVLVARS EVFKKILESD EFKASSKQME TVTLSEMKHE ELEAFVEFIY RVDGSICSAS
101: LKKHARSLFH AADKYEIPHL RDLCRNELIS SLNSSNALSI LELAQIPFDK ALNDPAFTTI ITNISTIASG DEFKLFVANH PNLAVDIMKA SITRLSTSRK
201: ICGYCNRYY

Arabidopsis Description

Putative BTB/POZ domain-containing protein At2g40450 [Source:UniProtKB/Swiss-Prot;Acc:O22890]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.