Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra007229.1-P | Field mustard | cytosol | 98.59 | 98.59 |
| CDY27231 | Canola | cytosol | 98.59 | 98.59 |
| AT3G56230.1 | Thale cress | cytosol | 82.69 | 82.98 |
| CDY32006 | Canola | nucleus | 54.42 | 66.67 |
| PGSC0003DMT400071906 | Potato | cytosol | 40.28 | 56.72 |
| VIT_13s0067g02290.t01 | Wine grape | cytosol, plastid | 51.94 | 54.44 |
| Solyc06g050860.2.1 | Tomato | cytosol | 51.94 | 52.69 |
| KRH31216 | Soybean | cytosol, plastid | 48.06 | 50.56 |
| KRG97659 | Soybean | cytosol, plastid | 47.35 | 49.81 |
| PGSC0003DMT400097598 | Potato | cytosol | 32.51 | 47.42 |
| Solyc05g052290.1.1 | Tomato | cytosol | 39.93 | 42.48 |
| CDX90048 | Canola | cytosol | 31.1 | 42.11 |
| Os12t0111500-02 | Rice | cytosol | 39.93 | 41.09 |
| Os11t0111900-01 | Rice | cytosol | 39.93 | 41.09 |
| GSMUA_Achr5P29570_001 | Banana | cytosol | 40.64 | 40.93 |
| CDY51160 | Canola | cytosol | 28.98 | 40.39 |
| CDX97765 | Canola | cytosol | 16.61 | 39.83 |
| CDY07220 | Canola | cytosol | 28.27 | 39.6 |
| TraesCS4D01G116200.2 | Wheat | cytosol | 39.22 | 38.81 |
| TraesCS4B01G118500.1 | Wheat | cytosol | 39.22 | 38.81 |
| EES09114 | Sorghum | cytosol | 37.81 | 38.63 |
| TraesCS4A01G196800.2 | Wheat | cytosol | 38.87 | 38.46 |
| CDY24906 | Canola | cytosol | 18.02 | 38.35 |
| Zm00001d036840_P001 | Maize | cytosol | 38.16 | 37.24 |
| HORVU4Hr1G022110.3 | Barley | cytosol | 37.1 | 36.84 |
| CDY23907 | Canola | cytosol | 25.44 | 36.0 |
| CDX79987 | Canola | cytosol | 25.09 | 35.68 |
| CDY23905 | Canola | cytosol | 24.38 | 34.16 |
| CDX79986 | Canola | cytosol | 22.61 | 32.65 |
| CDY08283 | Canola | cytosol | 24.03 | 31.34 |
| CDY07607 | Canola | cytosol | 24.73 | 31.11 |
| CDY24905 | Canola | cytosol | 22.97 | 31.1 |
| CDY07606 | Canola | cytosol | 22.97 | 31.1 |
| CDY32004 | Canola | cytosol | 20.85 | 29.65 |
| CDY31600 | Canola | cytosol | 22.61 | 29.63 |
| CDY19060 | Canola | mitochondrion | 17.31 | 28.66 |
| CDY24907 | Canola | cytosol | 24.03 | 28.22 |
| CDY34002 | Canola | cytosol | 5.3 | 21.13 |
| CDX83137 | Canola | cytosol | 19.43 | 20.6 |
| CDY34003 | Canola | nucleus | 12.37 | 20.23 |
| CDX67639 | Canola | cytosol | 34.63 | 19.1 |
| CDY52933 | Canola | cytosol | 18.73 | 17.97 |
Protein Annotations
| EnsemblPlants:CDX72156 | EnsemblPlantsGene:GSBRNA2T00155981001 | Gene3D:1.25.40.420 | Gene3D:3.30.710.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:BTB/POZ_dom | InterPro:IPR000210 | InterPro:SKP1/BTB/POZ_sf | PANTHER:PTHR24413 | PANTHER:PTHR24413:SF164 |
| PFAM:PF00651 | PFscan:PS50097 | ProteinID:CDX72156 | ProteinID:CDX72156.1 | SEG:seg | SMART:SM00225 |
| SUPFAM:SSF54695 | UniParc:UPI0004EB1D46 | MapMan:35.1 | : | : | : |
Description
BnaC08g27180D
Coordinates
chrLK031795:+:2731664..2732944
Molecular Weight (calculated)
31966.1 Da
IEP (calculated)
5.093
GRAVY (calculated)
-0.328
Length
283 amino acids
Sequence
(BLAST)
(BLAST)
001: MDCSVCTTMP SILRPPRNTI CGSCYEGART TIALLKKLEG ANEDQDHDKS TDKSTVNNGS SLSSSPLFSR EPQPLQKVIT WIKNMKETEE EQKKRIVFLS
101: SFVSGFKEQL HTDILLKPGD DGPHIPAHRA LLASKSEIFK NILDSDDCKT APEYAITLQE LNSEELQALL EFLYTGTLAS DKLEKHVYAL FVAADKYMIH
201: YLQEFCEQYM LSSLEISSVL DVLDVSDLAS SKTLKEAALG FVVRNMDDIV FSDNYEAFSQ KNQHLCVQIT RAFLMEMRSK RRD
101: SFVSGFKEQL HTDILLKPGD DGPHIPAHRA LLASKSEIFK NILDSDDCKT APEYAITLQE LNSEELQALL EFLYTGTLAS DKLEKHVYAL FVAADKYMIH
201: YLQEFCEQYM LSSLEISSVL DVLDVSDLAS SKTLKEAALG FVVRNMDDIV FSDNYEAFSQ KNQHLCVQIT RAFLMEMRSK RRD
001: MDCSICTTMP SILRPPRNTI CGSCYEGART TIALLKKLEG SKEDRHDKSN HNSTINNGSS ISSSPLFSCE PQPLEKVIKW MKNMKETEEE QKKRIVFLSS
101: FVSGFKEQLH ADILLKPGDD GPPIPAHRAL LASKSEIFKN ILDSDGCKTA PEYAITLQEL NSEQLQALLE FLYTGTLASD KLEKNVYALF IAADKYMIHY
201: LQELCEQYML SSLDISSVLN VLDVSDLGSS KTLKEACVGF VVRNMDDVVF SDKYEPFSQK NQHLCVEITR AFLMETRSKR RD
101: FVSGFKEQLH ADILLKPGDD GPPIPAHRAL LASKSEIFKN ILDSDGCKTA PEYAITLQEL NSEQLQALLE FLYTGTLASD KLEKNVYALF IAADKYMIHY
201: LQELCEQYML SSLDISSVLN VLDVSDLGSS KTLKEACVGF VVRNMDDVVF SDKYEPFSQK NQHLCVEITR AFLMETRSKR RD
Arabidopsis Description
BTB/POZ domain-containing protein At3g56230 [Source:UniProtKB/Swiss-Prot;Acc:Q9LYL9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.