CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 1
plastid 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG97659	Soybean	cytosol, plastid	95.91	95.91
PGSC0003DMT400071906	Potato	cytosol	41.64	55.72
VIT_13s0067g02290.t01	Wine grape	cytosol, plastid	53.9	53.7
PGSC0003DMT400097598	Potato	cytosol	37.17	51.55
Solyc06g050860.2.1	Tomato	cytosol	53.16	51.25
CDX72156	Canola	cytosol	50.56	48.06
Bra007229.1-P	Field mustard	cytosol	49.81	47.35
CDY27231	Canola	cytosol	49.81	47.35
AT3G56230.1	Thale cress	cytosol	49.07	46.81
Solyc05g052290.1.1	Tomato	cytosol	42.75	43.23
GSMUA_Achr5P29570_001	Banana	cytosol	42.38	40.57
Os12t0111500-02	Rice	cytosol	39.78	38.91
Os11t0111900-01	Rice	cytosol	39.03	38.18
HORVU4Hr1G022110.3	Barley	cytosol	40.15	37.89
TraesCS4D01G116200.2	Wheat	cytosol	40.15	37.76
EES09114	Sorghum	cytosol	38.29	37.18
TraesCS4A01G196800.2	Wheat	cytosol	39.41	37.06
TraesCS4B01G118500.1	Wheat	cytosol	38.66	36.36
CDY32006	Canola	nucleus	30.11	35.06
Zm00001d036840_P001	Maize	cytosol	36.8	34.14
KRH53314	Soybean	cytosol, mitochondrion	18.59	19.23
KRH64603	Soybean	cytosol	18.22	18.99

Protein Annotations

Gene3D:1.25.40.420	EntrezGene:100814664	Gene3D:3.30.710.10	MapMan:35.1	UniProt:A0A0R0HL69	EMBL:ACUP02007129
InterPro:BTB/POZ_dom	EnsemblPlantsGene:GLYMA_11G234900	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009987	GO:GO:0019005	GO:GO:0019538	GO:GO:0030162	GO:GO:0031625
GO:GO:0042787	GO:GO:0043161	InterPro:IPR000210	EnsemblPlants:KRH31216	ProteinID:KRH31216	ProteinID:KRH31216.1
PFAM:PF00651	PFscan:PS50097	PANTHER:PTHR24413	PANTHER:PTHR24413:SF164	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225
SUPFAM:SSF54695	UniParc:UPI0003DED02C	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr11:-:32998464..33000783

Molecular Weight (calculated)

30137.3 Da

IEP (calculated)

7.013

GRAVY (calculated)

-0.212

Length

269 amino acids

Sequence
(BLAST)

001: MDCCVCTTMP LILRPPRNTI CGACYEGVRS IINMMSNVES EKVKAMANPN QNSSPVSRRN SSKILDDCIR WCSEQTEQFN QQKEDMVFLR GFVAAFKAQI
101: HTDILVSPGR NGPPIPAHKS VLAARSEIFK NMLECDECKA APSNAITIPD LNHEELESLL EFLYSGTLNV EKLEKHVYAL SQAADKYVIP HLLKHCERYL
201: LSSLSTSNAL ETLEIADTCS NHNLKETTLN FLVKNIEHMV SSPKFEAFVH RSPHLTVQLV TRAFVNGAK

Best Arabidopsis Sequence Match ( AT3G56230.1 )
(BLAST)

001: MDCSICTTMP SILRPPRNTI CGSCYEGART TIALLKKLEG SKEDRHDKSN HNSTINNGSS ISSSPLFSCE PQPLEKVIKW MKNMKETEEE QKKRIVFLSS
101: FVSGFKEQLH ADILLKPGDD GPPIPAHRAL LASKSEIFKN ILDSDGCKTA PEYAITLQEL NSEQLQALLE FLYTGTLASD KLEKNVYALF IAADKYMIHY
201: LQELCEQYML SSLDISSVLN VLDVSDLGSS KTLKEACVGF VVRNMDDVVF SDKYEPFSQK NQHLCVEITR AFLMETRSKR RD

Arabidopsis Description

BTB/POZ domain-containing protein At3g56230 [Source:UniProtKB/Swiss-Prot;Acc:Q9LYL9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.