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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • mitochondrion 2
  • cytosol 2
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion
iPSORT:mitochondrion
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
Zm00001d018043_P001
Zm00001d036840_P001
Zm00001d042193_P001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G01640.1 Zm00001d036840_P001 AT1G01640.1 21798944
AT1G01640.1 Zm00001d018043_P001 AT1G26830.1 15772280
AT1G01640.1 Zm00001d042193_P001 AT4G02570.1 15659098
AT1G01640.1 Zm00001d042193_P001 AT4G02570.1 21798944
AT5G48510.1 Zm00001d018043_P001 AT1G26830.1 15772280
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os12t0111500-02 Rice cytosol 66.9 70.55
Os11t0111900-01 Rice cytosol 66.21 69.82
EES09114 Sorghum cytosol 66.55 69.68
TraesCS4A01G196800.2 Wheat cytosol 61.03 61.89
TraesCS4B01G118500.1 Wheat cytosol 61.03 61.89
TraesCS4D01G116200.2 Wheat cytosol 61.03 61.89
HORVU4Hr1G022110.3 Barley cytosol 60.69 61.75
GSMUA_Achr5P29570_001 Banana cytosol 46.9 48.4
AT1G01640.1 Thale cress cytosol 31.03 43.48
CDX90048 Canola cytosol 31.03 43.06
VIT_13s0067g02290.t01 Wine grape cytosol, plastid 39.66 42.59
PGSC0003DMT400071906 Potato cytosol 27.59 39.8
Bra033246.1-P Field mustard cytosol 27.93 38.76
Solyc06g050860.2.1 Tomato cytosol 37.24 38.71
AT3G56230.1 Thale cress cytosol 37.59 38.65
Bra007229.1-P Field mustard cytosol 37.59 38.52
CDY27231 Canola cytosol 37.59 38.52
CDX72156 Canola cytosol 37.24 38.16
CDX97765 Canola cytosol 15.17 37.29
KRG97659 Soybean cytosol, plastid 34.48 37.17
KRH31216 Soybean cytosol, plastid 34.14 36.8
PGSC0003DMT400097598 Potato cytosol 23.79 35.57
Solyc05g052290.1.1 Tomato cytosol 30.34 33.08
CDY51160 Canola cytosol 22.76 32.51
Bra037339.1-P Field mustard cytosol 22.76 32.51
CDY07220 Canola cytosol 21.72 31.19
Bra004569.1-P Field mustard cytosol 21.38 30.85
Bra021691.1-P Field mustard cytosol 21.38 30.85
CDX79987 Canola cytosol 21.03 30.65
CDY23907 Canola cytosol 20.69 30.0
CDY23905 Canola cytosol 20.69 29.7
CDX79986 Canola cytosol 20.0 29.59
CDY24906 Canola cytosol 13.45 29.32
AT2G40450.1 Thale cress cytosol 20.69 28.71
AT4G04090.1 Thale cress cytosol 18.97 28.65
Bra004570.1-P Field mustard cytosol 20.69 28.3
Bra000186.1-P Field mustard cytosol 20.0 27.75
CDY07606 Canola cytosol 20.0 27.75
CDY32004 Canola cytosol 18.97 27.64
CDY31600 Canola cytosol 20.34 27.31
CDY24905 Canola cytosol 19.66 27.27
CDY19060 Canola mitochondrion 15.86 26.9
CDY32006 Canola nucleus 21.38 26.84
Bra000185.1-P Field mustard cytosol 18.97 26.57
CDY08283 Canola cytosol 19.31 25.81
CDY07607 Canola cytosol 20.0 25.78
AT5G48510.1 Thale cress cytosol 18.62 24.11
CDY24907 Canola cytosol 20.0 24.07
Zm00001d019328_P003 Maize cytosol 21.03 22.76
Bra037082.1-P Field mustard cytosol, nucleus, plastid 12.07 22.15
AT2G05330.1 Thale cress cytosol 15.86 21.4
Bra017002.1-P Field mustard cytosol 18.28 18.73
CDY52933 Canola cytosol 17.93 17.63
Bra021693.1-P Field mustard cytosol 20.69 15.15
Bra003233.1-P Field mustard cytosol 26.21 14.81
CDX67639 Canola cytosol 24.83 14.04
Protein Annotations
Gene3D:1.25.40.420EntrezGene:100191568Gene3D:3.30.710.10MapMan:35.1ProteinID:AQK82272.1UniProt:B8A0Y1
EMBL:BT055223InterPro:BTB/POZ_domGO:GO:0003674GO:GO:0005488GO:GO:0005515InterPro:IPR000210
EMBL:KJ727725PFAM:PF00651PFscan:PS50097PANTHER:PTHR24413PANTHER:PTHR24413:SF164InterPro:SKP1/BTB/POZ_sf
SMART:SM00225SUPFAM:SSF54695UniParc:UPI0001917775EnsemblPlantsGene:Zm00001d036840EnsemblPlants:Zm00001d036840_P001EnsemblPlants:Zm00001d036840_T001
SEG:seg:::::
Description
BTB/POZ domain-containing protein
Coordinates
chr6:+:103387819..103389624
Molecular Weight (calculated)
31171.1 Da
IEP (calculated)
5.883
GRAVY (calculated)
-0.201
Length
290 amino acids
Sequence
(BLAST)
001: MDCCICSPVA SVYRLPRNAI CAPCHQGAKA IIGFLDRDGE REEDDGGGRS VQLQPRGSAK GLRDAWEQVK EMRAREEETR QRAAFLQHGF ASAWKEGIHT
101: DIVVKPGTGP AIPAHKAILA ARSEVFRHML SGDDRCKAPA GGSISLPELS HDDLSLLLAF LYTGALEAPG EGGGEASQDQ ERQLHALLVA ADKYDVPFLR
201: RVCEARLAAG VAPRNALRTL EVAELSSSAA LMERAMGAVV EHAEEVVFSA EYERFAARNA GLCVEITRAL LARMPTPARS DGPCLELGSS
Best Arabidopsis Sequence Match ( AT3G56230.1 )
(BLAST)
001: MDCSICTTMP SILRPPRNTI CGSCYEGART TIALLKKLEG SKEDRHDKSN HNSTINNGSS ISSSPLFSCE PQPLEKVIKW MKNMKETEEE QKKRIVFLSS
101: FVSGFKEQLH ADILLKPGDD GPPIPAHRAL LASKSEIFKN ILDSDGCKTA PEYAITLQEL NSEQLQALLE FLYTGTLASD KLEKNVYALF IAADKYMIHY
201: LQELCEQYML SSLDISSVLN VLDVSDLGSS KTLKEACVGF VVRNMDDVVF SDKYEPFSQK NQHLCVEITR AFLMETRSKR RD
Arabidopsis Description
BTB/POZ domain-containing protein At3g56230 [Source:UniProtKB/Swiss-Prot;Acc:Q9LYL9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.