Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY31600 | Canola | cytosol | 64.58 | 57.41 |
| AT2G40450.1 | Thale cress | cytosol | 54.69 | 50.24 |
| AT5G48510.1 | Thale cress | cytosol | 53.65 | 45.98 |
| AT2G05330.1 | Thale cress | cytosol | 44.27 | 39.53 |
| AT1G01640.1 | Thale cress | cytosol | 34.9 | 32.37 |
| GSMUA_Achr5P29570_001 | Banana | cytosol | 31.25 | 21.35 |
| EES09114 | Sorghum | cytosol | 29.17 | 20.22 |
| AT3G56230.1 | Thale cress | cytosol | 28.65 | 19.5 |
| HORVU4Hr1G022110.3 | Barley | cytosol | 28.65 | 19.3 |
| TraesCS4A01G196800.2 | Wheat | cytosol | 28.65 | 19.23 |
| TraesCS4D01G116200.2 | Wheat | cytosol | 28.65 | 19.23 |
| Zm00001d036840_P001 | Maize | cytosol | 28.65 | 18.97 |
| TraesCS4B01G118500.1 | Wheat | cytosol | 28.12 | 18.88 |
| Os11t0111900-01 | Rice | cytosol | 25.52 | 17.82 |
| Os12t0111500-02 | Rice | cytosol | 25.52 | 17.82 |
| AT4G08455.1 | Thale cress | cytosol | 24.48 | 17.41 |
Protein Annotations
| Gene3D:3.30.710.10 | MapMan:35.1 | EntrezGene:825720 | ProteinID:AAC28212.1 | ProteinID:AEE82368.1 | ArrayExpress:AT4G04090 |
| EnsemblPlantsGene:AT4G04090 | RefSeq:AT4G04090 | TAIR:AT4G04090 | RefSeq:AT4G04090-TAIR-G | EnsemblPlants:AT4G04090.1 | TAIR:AT4G04090.1 |
| Unigene:At.54130 | InterPro:BTB/POZ_dom | ProteinID:CAB77877.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006464 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016567 | GO:GO:0019005 | GO:GO:0019538 |
| GO:GO:0030162 | GO:GO:0031625 | GO:GO:0042787 | GO:GO:0043161 | InterPro:IPR000210 | RefSeq:NP_192318.1 |
| UniProt:O81432 | PFAM:PF00651 | PFscan:PS50097 | PANTHER:PTHR24413 | PANTHER:PTHR24413:SF164 | InterPro:SKP1/BTB/POZ_sf |
| SMART:SM00225 | SUPFAM:SSF54695 | UniParc:UPI00000A2208 | SEG:seg | : | : |
Description
Putative BTB/POZ domain-containing protein At4g04090 [Source:UniProtKB/Swiss-Prot;Acc:O81432]
Coordinates
chr4:+:1964980..1965650
Molecular Weight (calculated)
21843.3 Da
IEP (calculated)
8.648
GRAVY (calculated)
-0.282
Length
192 amino acids
Sequence
(BLAST)
(BLAST)
001: MGTQTNKGFF YDEFLKVLKE QQVDVRLMAR DSEKDAAISA HKRILSARSE VFEEMFESDK YKASSKLETI TLSEMKHEVL EAFVDFTYSD GSMLSEKAKQ
101: HAMSLYSAAK DYEIPRLWCL CRKELIASLN MSNALRVLQL AQIPYDESLS VAAFTTIKNS KLKLSSSTKV KVFVVNHPNG PLEITRAIFP RN
101: HAMSLYSAAK DYEIPRLWCL CRKELIASLN MSNALRVLQL AQIPYDESLS VAAFTTIKNS KLKLSSSTKV KVFVVNHPNG PLEITRAIFP RN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.