Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX90048 | Canola | cytosol | 76.33 | 75.6 |
| Bra033246.1-P | Field mustard | cytosol | 68.12 | 67.46 |
| AT2G40450.1 | Thale cress | cytosol | 37.68 | 37.32 |
| AT4G04090.1 | Thale cress | cytosol | 32.37 | 34.9 |
| AT5G48510.1 | Thale cress | cytosol | 36.72 | 33.93 |
| GSMUA_Achr5P29570_001 | Banana | cytosol | 43.48 | 32.03 |
| AT2G05330.1 | Thale cress | cytosol | 32.85 | 31.63 |
| Zm00001d036840_P001 | Maize | cytosol | 43.48 | 31.03 |
| EES09114 | Sorghum | cytosol | 41.06 | 30.69 |
| AT3G56230.1 | Thale cress | cytosol | 40.58 | 29.79 |
| TraesCS4D01G116200.2 | Wheat | cytosol | 41.06 | 29.72 |
| HORVU4Hr1G022110.3 | Barley | cytosol | 40.58 | 29.47 |
| Os12t0111500-02 | Rice | cytosol | 39.13 | 29.45 |
| TraesCS4A01G196800.2 | Wheat | cytosol | 40.58 | 29.37 |
| TraesCS4B01G118500.1 | Wheat | cytosol | 40.58 | 29.37 |
| Os11t0111900-01 | Rice | cytosol | 38.65 | 29.09 |
| AT4G08455.1 | Thale cress | cytosol | 27.05 | 20.74 |
Protein Annotations
| Gene3D:1.25.40.420 | Gene3D:3.30.710.10 | MapMan:35.1 | EntrezGene:839534 | UniProt:A0A178WIE3 | ProteinID:AAF78396.1 |
| ProteinID:AEE27315.1 | EMBL:AK229678 | ArrayExpress:AT1G01640 | EnsemblPlantsGene:AT1G01640 | RefSeq:AT1G01640 | TAIR:AT1G01640 |
| RefSeq:AT1G01640-TAIR-G | EnsemblPlants:AT1G01640.1 | TAIR:AT1G01640.1 | EMBL:BT010191 | InterPro:BTB/POZ_dom | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016567 |
| GO:GO:0019005 | GO:GO:0019538 | GO:GO:0030162 | GO:GO:0031625 | GO:GO:0042787 | GO:GO:0043161 |
| InterPro:IPR000210 | RefSeq:NP_171670.1 | ProteinID:OAP17874.1 | PFAM:PF00651 | PO:PO:0000084 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0004507 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | PFscan:PS50097 | PANTHER:PTHR24413 | PANTHER:PTHR24413:SF164 | UniProt:Q9LQ95 | InterPro:SKP1/BTB/POZ_sf |
| SMART:SM00225 | SUPFAM:SSF54695 | UniParc:UPI000009FBD7 | : | : | : |
Description
BTB/POZ domain-containing protein At1g01640 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQ95]
Coordinates
chr1:-:230908..232630
Molecular Weight (calculated)
23373.0 Da
IEP (calculated)
6.398
GRAVY (calculated)
-0.321
Length
207 amino acids
Sequence
(BLAST)
(BLAST)
001: MTEAEQKAAF LGGLVVSFKE QMHTDVLVKP GEEAPPIPTH KAVLAARSKV FRNMLDSDEC KTSPEESITL PDLSHDELKS LLEFLYSGNL KAPYNQYRSL
101: YLAADKYDIS YLQDVCRNHF IASLSSRNVL DILELASIPC DTILKDAAIN HIVKHMEEVV VPMKYETFVQ RNPDLSVEIT RAYLRETKAK AKDHGAPLNG
201: NTRPRIW
101: YLAADKYDIS YLQDVCRNHF IASLSSRNVL DILELASIPC DTILKDAAIN HIVKHMEEVV VPMKYETFVQ RNPDLSVEIT RAYLRETKAK AKDHGAPLNG
201: NTRPRIW
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.