Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY08283 | Canola | cytosol | 63.39 | 65.44 |
| AT2G40450.1 | Thale cress | cytosol | 60.71 | 65.07 |
| Bra037082.1-P | Field mustard | cytosol, nucleus, plastid | 41.96 | 59.49 |
| AT2G05330.1 | Thale cress | cytosol | 53.57 | 55.81 |
| AT4G04090.1 | Thale cress | cytosol | 45.98 | 53.65 |
| AT1G01640.1 | Thale cress | cytosol | 33.93 | 36.72 |
| GSMUA_Achr5P29570_001 | Banana | cytosol | 25.45 | 20.28 |
| AT3G56230.1 | Thale cress | cytosol | 25.45 | 20.21 |
| AT4G08455.1 | Thale cress | cytosol | 23.66 | 19.63 |
| EES09114 | Sorghum | cytosol | 23.66 | 19.13 |
| Zm00001d036840_P001 | Maize | cytosol | 24.11 | 18.62 |
| TraesCS4A01G196800.2 | Wheat | cytosol | 23.66 | 18.53 |
| TraesCS4B01G118500.1 | Wheat | cytosol | 23.66 | 18.53 |
| TraesCS4D01G116200.2 | Wheat | cytosol | 23.21 | 18.18 |
| HORVU4Hr1G022110.3 | Barley | cytosol | 22.77 | 17.89 |
| Os11t0111900-01 | Rice | cytosol | 21.43 | 17.45 |
| Os12t0111500-02 | Rice | cytosol | 21.43 | 17.45 |
Protein Annotations
| Gene3D:1.25.40.420 | Gene3D:3.30.710.10 | MapMan:35.1 | EntrezGene:834907 | ProteinID:AED95679.1 | ArrayExpress:AT5G48510 |
| EnsemblPlantsGene:AT5G48510 | RefSeq:AT5G48510 | TAIR:AT5G48510 | RefSeq:AT5G48510-TAIR-G | EnsemblPlants:AT5G48510.1 | TAIR:AT5G48510.1 |
| Unigene:At.55433 | ProteinID:BAA96971.1 | InterPro:BTB/POZ_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006464 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016567 | GO:GO:0019005 | GO:GO:0019538 |
| GO:GO:0030162 | GO:GO:0031625 | GO:GO:0042787 | GO:GO:0043161 | InterPro:IPR000210 | RefSeq:NP_199662.1 |
| PFAM:PF00651 | PFscan:PS50097 | PANTHER:PTHR24413 | PANTHER:PTHR24413:SF164 | UniProt:Q9LV63 | InterPro:SKP1/BTB/POZ_sf |
| SMART:SM00225 | SUPFAM:SSF54695 | UniParc:UPI00000A97D3 | SEG:seg | : | : |
Description
BTB/POZ domain-containing protein At5g48510 [Source:UniProtKB/Swiss-Prot;Acc:Q9LV63]
Coordinates
chr5:+:19658080..19658938
Molecular Weight (calculated)
24998.2 Da
IEP (calculated)
6.388
GRAVY (calculated)
0.027
Length
224 amino acids
Sequence
(BLAST)
(BLAST)
001: MATPTNKEHF SGGLAKVLAE KWQVDVMLKA KNSDEGSAIS AHKLILASRS EVFKNMFELD EFKTSTKHVE TITLSEMKHE ELEAFVEFIC SDGSMLSANV
101: KQHARSLYLA ADKYEILHLR DLCRTELISS LSLLNSLDLL VLAQIPFDKV LNDESFSYIK NNISTIASSD EFKLFVAGNP NLAVEIMKVS LITLTLRCSS
201: CGSNHSLQGM YCCNCCRYGT LRLI
101: KQHARSLYLA ADKYEILHLR DLCRTELISS LSLLNSLDLL VLAQIPFDKV LNDESFSYIK NNISTIASSD EFKLFVAGNP NLAVEIMKVS LITLTLRCSS
201: CGSNHSLQGM YCCNCCRYGT LRLI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.