Factsheet for Bra037339.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY51160	Canola	cytosol	99.51	99.51
Bra033246.1-P	Field mustard	cytosol	45.32	44.02
Bra021691.1-P	Field mustard	cytosol	36.95	37.31
Bra004569.1-P	Field mustard	cytosol	33.0	33.33
Bra000186.1-P	Field mustard	cytosol	33.99	33.01
Bra004570.1-P	Field mustard	cytosol	33.99	32.55
Bra000185.1-P	Field mustard	cytosol	32.51	31.88
Bra037082.1-P	Field mustard	cytosol, nucleus, plastid	23.65	30.38
Bra007229.1-P	Field mustard	cytosol	40.89	29.33
GSMUA_Achr5P29570_001	Banana	cytosol	34.48	24.91
EES09114	Sorghum	cytosol	33.5	24.55
Zm00001d036840_P001	Maize	cytosol	32.51	22.76
Os11t0111900-01	Rice	cytosol	30.54	22.55
Os12t0111500-02	Rice	cytosol	30.54	22.55
TraesCS4A01G196800.2	Wheat	cytosol	31.53	22.38
TraesCS4B01G118500.1	Wheat	cytosol	31.53	22.38
TraesCS4D01G116200.2	Wheat	cytosol	31.53	22.38
HORVU4Hr1G022110.3	Barley	cytosol	31.03	22.11
Bra017002.1-P	Field mustard	cytosol	28.57	20.49
Bra021693.1-P	Field mustard	cytosol	35.96	18.43
Bra003233.1-P	Field mustard	cytosol	25.12	9.94

Protein Annotations

EnsemblPlants:Bra037339.1	EnsemblPlants:Bra037339.1-P	EnsemblPlantsGene:Bra037339	Gene3D:3.30.710.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:BTB/POZ_dom	InterPro:IPR000210	InterPro:SKP1/BTB/POZ_sf	PANTHER:PTHR24413	PANTHER:PTHR24413:SF164
PFAM:PF00651	PFscan:PS50097	SMART:SM00225	SUPFAM:SSF54695	UniParc:UPI0002541AAB	UniProt:M4F8C7
MapMan:35.1	:	:	:	:	:

Description

AT1G01640 (E=6e-052) | speckle-type POZ protein-related

Coordinates

chrA09:+:992630..993330

Molecular Weight (calculated)

22983.9 Da

IEP (calculated)

6.677

GRAVY (calculated)

-0.088

Length

203 amino acids

Sequence
(BLAST)

001: MAEESTKRKF ERVDFLSDHV MALKEAMHAD FILKPGDNGP GIPTHKAVLA VKSKVFRSML EADECKVSPE KSITIHDLSY GELESLLEFF YSGTLSRDNK
101: HVRALYLAAD KYDIQYLQDI CREILISSLS SENVLDIIQL STIPSDAILK EAAILFLLRR NIGMVFQKSF ETFALKDPST TLEIFQACIR ILRALSRKPT
201: QPN

Best Arabidopsis Sequence Match ( AT1G01640.1 )
(BLAST)

001: MTEAEQKAAF LGGLVVSFKE QMHTDVLVKP GEEAPPIPTH KAVLAARSKV FRNMLDSDEC KTSPEESITL PDLSHDELKS LLEFLYSGNL KAPYNQYRSL
101: YLAADKYDIS YLQDVCRNHF IASLSSRNVL DILELASIPC DTILKDAAIN HIVKHMEEVV VPMKYETFVQ RNPDLSVEIT RAYLRETKAK AKDHGAPLNG
201: NTRPRIW

Arabidopsis Description

BTB/POZ domain-containing protein At1g01640 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQ95]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.