Factsheet for Bra021693.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plasma membrane 3
extracellular 2
endoplasmic reticulum 2
vacuole 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX97765	Canola	cytosol	26.26	88.14
Bra021691.1-P	Field mustard	cytosol	42.17	83.08
Bra000185.1-P	Field mustard	cytosol	28.54	54.59
Bra000186.1-P	Field mustard	cytosol	28.79	54.55
Bra004569.1-P	Field mustard	cytosol	27.27	53.73
Bra037082.1-P	Field mustard	cytosol, nucleus, plastid	19.7	49.37
Bra004570.1-P	Field mustard	cytosol	25.0	46.7
Bra037339.1-P	Field mustard	cytosol	18.43	35.96
Bra033246.1-P	Field mustard	cytosol	17.93	33.97
Bra017002.1-P	Field mustard	cytosol	17.68	24.73
GSMUA_Achr5P29570_001	Banana	cytosol	16.67	23.49
Bra007229.1-P	Field mustard	cytosol	16.67	23.32
EES09114	Sorghum	cytosol	14.9	21.3
Zm00001d036840_P001	Maize	cytosol	15.15	20.69
TraesCS4A01G196800.2	Wheat	cytosol	14.9	20.63
TraesCS4D01G116200.2	Wheat	cytosol	14.9	20.63
HORVU4Hr1G022110.3	Barley	cytosol	14.65	20.35
TraesCS4B01G118500.1	Wheat	cytosol	14.39	19.93
Os12t0111500-02	Rice	cytosol	13.64	19.64
Os11t0111900-01	Rice	cytosol	13.38	19.27
Bra003233.1-P	Field mustard	cytosol	17.93	13.84

Protein Annotations

EnsemblPlants:Bra021693.1	EnsemblPlants:Bra021693.1-P	EnsemblPlantsGene:Bra021693	Gene3D:1.25.40.420	Gene3D:3.30.710.10	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:BTB/POZ_dom	InterPro:IPR000210	InterPro:SKP1/BTB/POZ_sf	PANTHER:PTHR24413
PANTHER:PTHR24413:SF164	PFAM:PF00651	PFscan:PS50097	SMART:SM00225	SUPFAM:SSF54695	UniParc:UPI00025449AE
UniProt:M4DYU7	MapMan:35.1	:	:	:	:

Description

AT2G40450 (E=2e-057) | speckle-type POZ protein-related

Coordinates

chrA04:-:13884513..13886826

Molecular Weight (calculated)

44827.0 Da

IEP (calculated)

6.789

GRAVY (calculated)

-0.215

Length

396 amino acids

Sequence
(BLAST)

001: MAKQSNLNIF LDGFAHILEE QWQVDVLLKA GDSHPDAAIS AHKLVLAARS KVFKKMLEED ECKTSSEKEI ITLSEMKHEE LKALVEFIYS DGSTPCAGHA
101: RSLYLAADKY DIPHLRDLSR NELISSLNAS NAHDVYVLAQ IPFDEAINNA ALSCIRINIA TIAYSDELKL FAESNPNLTV EIMKACVEQS IKVRGVKENT
201: ELDEFKAPSQ PVEAARPSLQ KGRRSMDVGP IVSFEKKMIT ERPKKNIRKN PEIFCCRGHY VMLKRSCETV TFSELKHEEL EALVKFVYSD VSKLSAKAKE
301: HVRSLYVTAD KYEIPHLRDL CRNELVKSLT LSNALEVLEL SLIPLDNALH DAAFSYIINN LKTIANSLEF KLFATRNTDL TVEIIRAYMA RRNIYY

Best Arabidopsis Sequence Match ( AT2G40450.1 )
(BLAST)

001: MATQSNKEAF LGGFKKLLNE QWQADVRLKA GDSDETTSIF AHKLVLVARS EVFKKILESD EFKASSKQME TVTLSEMKHE ELEAFVEFIY RVDGSICSAS
101: LKKHARSLFH AADKYEIPHL RDLCRNELIS SLNSSNALSI LELAQIPFDK ALNDPAFTTI ITNISTIASG DEFKLFVANH PNLAVDIMKA SITRLSTSRK
201: ICGYCNRYY

Arabidopsis Description

Putative BTB/POZ domain-containing protein At2g40450 [Source:UniProtKB/Swiss-Prot;Acc:O22890]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.