Factsheet for Bra004569.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plasma membrane 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX79987	Canola	cytosol	98.01	99.0
Bra000186.1-P	Field mustard	cytosol	56.72	54.55
Bra021691.1-P	Field mustard	cytosol	54.23	54.23
Bra000185.1-P	Field mustard	cytosol	55.22	53.62
Bra037082.1-P	Field mustard	cytosol, nucleus, plastid	35.32	44.94
Bra004570.1-P	Field mustard	cytosol	47.26	44.81
Bra037339.1-P	Field mustard	cytosol	33.33	33.0
Bra033246.1-P	Field mustard	cytosol	32.34	31.1
Bra021693.1-P	Field mustard	cytosol	53.73	27.27
Bra007229.1-P	Field mustard	cytosol	35.32	25.09
Bra017002.1-P	Field mustard	cytosol	33.33	23.67
TraesCS4B01G118500.1	Wheat	cytosol	31.84	22.38
Os11t0111900-01	Rice	cytosol	30.35	22.18
Os12t0111500-02	Rice	cytosol	30.35	22.18
TraesCS4D01G116200.2	Wheat	cytosol	31.34	22.03
TraesCS4A01G196800.2	Wheat	cytosol	30.85	21.68
EES09114	Sorghum	cytosol	29.85	21.66
HORVU4Hr1G022110.3	Barley	cytosol	30.35	21.4
Zm00001d036840_P001	Maize	cytosol	30.85	21.38
GSMUA_Achr5P29570_001	Banana	cytosol	27.36	19.57
Bra003233.1-P	Field mustard	cytosol	36.82	14.43

Protein Annotations

EnsemblPlants:Bra004569.1	EnsemblPlants:Bra004569.1-P	EnsemblPlantsGene:Bra004569	Gene3D:1.25.40.420	Gene3D:3.30.710.10	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:BTB/POZ_dom	InterPro:IPR000210	InterPro:SKP1/BTB/POZ_sf	PANTHER:PTHR24413
PANTHER:PTHR24413:SF164	PFAM:PF00651	PFscan:PS50097	SMART:SM00225	SUPFAM:SSF54695	UniParc:UPI00025474C7
UniProt:M4CK35	MapMan:35.1	:	:	:	:

Description

AT2G40450 (E=6e-062) | speckle-type POZ protein-related

Coordinates

chrA05:-:832051..832790

Molecular Weight (calculated)

22926.8 Da

IEP (calculated)

5.724

GRAVY (calculated)

-0.028

Length

201 amino acids

Sequence
(BLAST)

001: MTTENNLEIF LGGFAKVFNE QWQVDVRLKA GDSNENAAIS AHKLVLAARS EVFKKMLESD KFKGTADQIE TVTLPELKQE ELEALVGFIY NNRSVLSEKE
101: KIHAQTLFVA ADKYDIPHLR DLCRKELISS LKLANVINIL ELSLIPFDEA LNDAAVMFVV RNLLAICDTV EFKLFVVTNP DLTVDIMKSS KSRRWKHYYI
201: F

Best Arabidopsis Sequence Match ( AT2G40450.1 )
(BLAST)

001: MATQSNKEAF LGGFKKLLNE QWQADVRLKA GDSDETTSIF AHKLVLVARS EVFKKILESD EFKASSKQME TVTLSEMKHE ELEAFVEFIY RVDGSICSAS
101: LKKHARSLFH AADKYEIPHL RDLCRNELIS SLNSSNALSI LELAQIPFDK ALNDPAFTTI ITNISTIASG DEFKLFVANH PNLAVDIMKA SITRLSTSRK
201: ICGYCNRYY

Arabidopsis Description

Putative BTB/POZ domain-containing protein At2g40450 [Source:UniProtKB/Swiss-Prot;Acc:O22890]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.