Factsheet for Os02t0746000-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0194300-01
Os01t0279200-02
Os01t0740500-00
Os01t0740600-01
Os01t0740650-00
Os01t0743300-01
Os01t0893400-01
Os01t0908200-01
Os02t0596700-00
Os04t0482300-01
Os05t0398100-01
Os07t0101400-01
Os07t0167200-01
Os07t0258700-01
Os07t0655300-01
Os11t0111900-01
Os12t0111500-02

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G26830.1	Os11t0111900-01	AT1G01640.1	15772280
AT1G26830.1	Os12t0111500-02	AT1G01640.1	15772280
AT1G26830.1	Os01t0893400-01	AT1G05690.1	15772280
AT1G26830.1	Os01t0194300-01	AT1G64280.1	19490895
AT1G26830.1	Os01t0279200-02	AT2G26990.1	12615944
AT1G26830.1	Os07t0101400-01	AT2G39760.1	15618422
AT1G26830.1	Os07t0101400-01	AT2G39760.1	15659098
AT1G26830.1	Os07t0101400-01	AT2G39760.1	15772280
AT1G26830.1	Os07t0655300-01	AT3G06190.1	15772280
AT1G26830.1	Os07t0167200-01	AT3G43700.1	15772280
AT1G26830.1	Os01t0908200-01	AT3G48360.1	15772280
AT1G26830.1	Os02t0596700-00	AT3G48360.1	15772280
AT1G26830.1	Os04t0482300-01	AT3G48360.1	15772280
AT1G26830.1	Os01t0740500-00	AT4G07670.1	15749712
AT1G26830.1	Os01t0740600-01	AT4G07670.1	15749712
AT1G26830.1	Os01t0740650-00	AT4G07670.1	15749712
AT1G26830.1	Os01t0743300-01	AT4G07670.1	15749712
AT1G26830.1	Os07t0258700-01	AT4G08455.1	15749712
AT1G26830.1	Os05t0398100-01	AT5G13060.1	15659098
AT1G26830.1	Os11t0111900-01	AT5G48510.1	15772280
AT1G26830.1	Os12t0111500-02	AT5G48510.1	15772280
AT1G26830.1	Os01t0908200-01	AT5G63160.1	15772280
AT1G26830.1	Os02t0596700-00	AT5G63160.1	15772280
AT1G26830.1	Os04t0482300-01	AT5G63160.1	15772280
AT1G69670.1	Os07t0101400-01	AT2G39760.1	15618422
AT1G69670.1	Os07t0101400-01	AT2G39760.1	15659098
AT1G69670.1	Os01t0740500-00	AT4G07670.1	15749712
AT1G69670.1	Os01t0740600-01	AT4G07670.1	15749712
AT1G69670.1	Os01t0740650-00	AT4G07670.1	15749712
AT1G69670.1	Os01t0743300-01	AT4G07670.1	15749712
AT1G69670.1	Os07t0258700-01	AT4G08455.1	15749712
AT1G69670.1	Os05t0398100-01	AT5G13060.1	15659098

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES05529	Sorghum	cytosol	94.7	94.7
TraesCS6B01G335200.1	Wheat	cytosol	94.16	94.16
TraesCS6A01G306600.1	Wheat	cytosol	94.02	94.02
TraesCS6D01G285800.1	Wheat	cytosol	94.02	94.02
Zm00001d018043_P001	Maize	cytosol	93.75	93.75
HORVU6Hr1G075720.2	Barley	cytosol	93.07	91.82
GSMUA_Achr7P18000_001	Banana	cytosol	82.2	85.45
GSMUA_Achr8P16990_001	Banana	cytosol	81.79	85.03
GSMUA_AchrUn_...	Banana	cytosol	81.39	84.6
VIT_01s0026g02230.t01	Wine grape	cytosol	81.66	81.99
PGSC0003DMT400003338	Potato	cytosol	81.52	81.86
Solyc02g087900.2.1	Tomato	cytosol	81.39	81.72
KRG93520	Soybean	cytosol	80.98	81.31
Solyc01g010820.2.1	Tomato	cytosol	80.84	81.06
KRH18483	Soybean	cytosol	80.71	81.04
PGSC0003DMT400016765	Potato	cytosol	80.43	80.65
KRH45896	Soybean	cytosol	79.48	79.92
KRG99095	Soybean	cytosol	79.35	79.78
AT1G26830.1	Thale cress	cytosol	78.67	79.1
Os04t0643000-01	Rice	cytosol, plasma membrane	78.53	79.07
CDY50732	Canola	cytosol	77.72	78.14
CDY16196	Canola	cytosol	77.72	78.14
AT1G69670.1	Thale cress	cytosol	77.58	78.01
Bra024680.1-P	Field mustard	cytosol	77.45	77.87
Bra016291.1-P	Field mustard	cytosol	77.31	77.73
CDY46437	Canola	cytosol	77.17	77.6
CDY45004	Canola	cytosol	77.17	77.6
VIT_14s0108g00490.t01	Wine grape	cytosol	82.2	77.17
Os08t0170900-01	Rice	cytosol	76.49	77.02
KRH70713	Soybean	cytosol	69.97	70.84
Os03t0786800-01	Rice	cytosol, plasma membrane	9.65	45.81
Os05t0149600-02	Rice	cytosol, plasma membrane	14.54	41.31
Os01t0369000-01	Rice	cytosol	34.78	34.41
Os01t0369200-01	Rice	cytosol	31.93	31.5
Os05t0193900-00	Rice	cytosol	12.09	22.08
Os01t0935300-02	Rice	cytosol	8.97	22.0
Os01t0706200-01	Rice	cytosol	3.53	16.25

Protein Annotations

Gene3D:1.10.10.10	Gene3D:1.10.10.2620	Gene3D:1.20.1310.10	MapMan:19.2.2.8.2.1	EntrezGene:4330720	EMBL:AK072402
ProteinID:BAD15552.1	ProteinID:BAD16320.1	ProteinID:BAF10028.1	ProteinID:BAS80910.1	InterPro:Cullin_N	InterPro:Cullin_homology
InterPro:Cullin_homology_sf	InterPro:Cullin_neddylation_domain	InterPro:Cullin_repeat-like_dom_sf	ProteinID:EAZ24610.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464
GO:GO:0006511	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016567
GO:GO:0016740	GO:GO:0019538	GO:GO:0031461	GO:GO:0031625	GO:GO:0061630	InterPro:IPR016158
InterPro:IPR036388	EnsemblPlantsGene:Os02g0746000	EnsemblPlants:Os02t0746000-01	PFAM:PF00888	PFAM:PF10557	PFscan:PS50069
PANTHER:PTHR11932	PANTHER:PTHR11932:SF74	UniProt:Q6YWY5	SMART:SM00182	SMART:SM00884	SUPFAM:SSF46785
SUPFAM:SSF74788	SUPFAM:SSF75632	UniParc:UPI0000358AB1	InterPro:WH-like_DNA-bd_sf	InterPro:WH_DNA-bd_sf	RefSeq:XP_015626686.1

Description

CULLIN 3ACullin3a protein, Regulation of cell death and immunity (Os02t0746000-01)

Coordinates

chr2:-:31309754..31312787

Molecular Weight (calculated)

85755.4 Da

IEP (calculated)

7.638

GRAVY (calculated)

-0.553

Length

736 amino acids

Sequence
(BLAST)

001: MSGGGPPKKR NFKIELFKHR VELDPKYAER TWKVLEHAIH EIYNHNASGL SFEELYRSAY NMVLHKYGEK LYDGLERTMT WRLKEISKSI EAAQGGLFLE
101: ELNAKWMDHN KALQMIRDIL MYMDRTYVPQ SRRTPVHELG LNLWRDHIIH SPMIHSRLLD TLLDLIHRER MGEMINRGLM RSITKMLMDL GAAVYQDDFE
201: KPFLDVTASF YSGESQEFIE CCDCGNYLKK SERRLNEEME RVSHYLDSGT EAKITSVVEK EMIANHMHRL VHMENSGLVN MLVDDKYDDL ARMYNLFRRV
301: FDGLSTIRDV MTSYLRETGK QLVTDPERLK DPVEFVQRLL NEKDKHDKII NVAFGNDKTF QNALNSSFEY FINLNNRSPE FISLYVDDKL RKGLKGATEE
401: DVEVILDKVM MLFRYLQEKD VFEKYYKQHL AKRLLSGKTV SDDAERSMIV KLKTECGYQF TSKLEGMFTD MKTSQDTMID FYAKKSEELG DGPTLDVHIL
501: TTGSWPTQPC PPCNLPTEIL AICDKFRTYY LGTHSGRRLT WQTNMGTADI KATFGKGQKH ELNVSTYQMC VLMLFNSTDG LTYKDIEQDT AIPASDLKRC
601: LQSLACVKGK NVLRKEPMSK DISEDDTFYF NDKFTSKLVK VKIGTVVAQK ESEPEKQETR QRVEEDRKPQ IEAAIVRIMK SRRVLDHNSI VAEVTKQLQA
701: RFMPNPVVIK KRIESLIERE FLERDKADRK LYRYLA

Best Arabidopsis Sequence Match ( AT1G26830.1 )
(BLAST)

001: MSNQKKRNFQ IEAFKHRVVV DPKYADKTWQ ILERAIHQIY NQDASGLSFE ELYRNAYNMV LHKFGEKLYT GFIATMTSHL KEKSKLIEAA QGGSFLEELN
101: KKWNEHNKAL EMIRDILMYM DRTYIESTKK THVHPMGLNL WRDNVVHFTK IHTRLLNTLL DLVQKERIGE VIDRGLMRNV IKMFMDLGES VYQEDFEKPF
201: LDASSEFYKV ESQEFIESCD CGDYLKKSEK RLTEEIERVA HYLDAKSEEK ITSVVEKEMI ANHMQRLVHM ENSGLVNMLL NDKYEDLGRM YNLFRRVTNG
301: LVTVRDVMTS HLREMGKQLV TDPEKSKDPV EFVQRLLDER DKYDKIINTA FGNDKTFQNA LNSSFEYFIN LNARSPEFIS LFVDDKLRKG LKGITDVDVE
401: VILDKVMMLF RYLQEKDVFE KYYKQHLAKR LLSGKTVSDD AERSLIVKLK TECGYQFTSK LEGMFTDMKT SEDTMRGFYG SHPELSEGPT LIVQVLTTGS
501: WPTQPAVPCN LPAEVSVLCE KFRSYYLGTH TGRRLSWQTN MGTADIKAIF GKGQKHELNV STFQMCVLML FNNSDRLSYK EIEQATEIPA ADLKRCLQSL
601: ACVKGKNVIK KEPMSKDIGE EDLFVVNDKF TSKFYKVKIG TVVAQKETEP EKQETRQRVE EDRKPQIEAA IVRIMKSRKI LDHNNIIAEV TKQLQPRFLA
701: NPTEIKKRIE SLIERDFLER DSTDRKLYRY LA

Arabidopsis Description

CUL3ACUL3A [Source:UniProtKB/TrEMBL;Acc:A0A178WM88]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.